P02338 (PRTL_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protamine-like protein

Gene names

Name:	tpr
Ordered Locus Names:	b1229, JW1219

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	29 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence caution

The sequence AAA24670.1 differs from that shown. Reason: Erroneous initiation. The sequence BAA36099.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 29	29	Protamine-like protein		PRO_0000097053

Sequences

	Sequence		Length	Mass (Da)
	P02338 [UniParc]. Last modified June 26, 2007. Version 2. Checksum: 4B039533A2E99C77	FASTA	29	3,447
	10 20 MRSFDQGSTR APARERCRRQ RPEGRSAQR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The tyrT locus: termination and processing of a complex transcript." Rossi J., Egan J., Hudson L., Landy A. Cell 26:305-314(1981) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"An E. coli gene coding for a protamine-like protein." Altman S., Model P., Dixon G.H., Wosnick M.A. Cell 26:299-304(1981) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]	"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T. DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[5]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	K01197 Genomic DNA. Translation: AAA24670.1. Different initiation. U00096 Genomic DNA. Translation: AAC74313.2. AP009048 Genomic DNA. Translation: BAA36099.1. Different initiation.
PIR	WRECP1. A90813.
RefSeq	NP_415747.2. NC_000913.2. YP_489499.1. NC_007779.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b1229.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC74313; AAC74313; b1229. BAA36099; BAA36099; BAA36099.
GeneID	12932935. 946224.
KEGG	ecj:Y75_p1204. eco:b1229.
Organism-specific databases
EchoBASE	EB1009.
EcoGene	EG11016. tpr.
Phylogenomic databases
HOGENOM	HOG000054855.
ProtClustDB	PRK14757.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11016-MONOMER. ECOL316407:JW1219-MONOMER.
Gene expression databases
Genevestigator	P02338.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

PRTL_ECOLI

Accession

Primary (citable) accession number: P02338

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 21, 1986
Last sequence update:	June 26, 2007
Last modified:	May 1, 2013
This is version 75 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program