Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ig kappa chain C region, B allele

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Ig kappa chain C region, B allele
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000153605‹1 – 106Ig kappa chain C region, B alleleAdd BLAST›106

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi26 ↔ 86
Disulfide bondi106Interchain (with a heavy chain)

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP01835.
PRIDEiP01835.

Expressioni

Gene expression databases

GenevisibleiP01835. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000066644.

Structurei

Secondary structure

1106
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 10Combined sources5
Helixi14 – 17Combined sources4
Turni18 – 20Combined sources3
Beta strandi21 – 34Combined sources14
Beta strandi37 – 42Combined sources6
Beta strandi45 – 47Combined sources3
Beta strandi51 – 55Combined sources5
Turni60 – 62Combined sources3
Beta strandi65 – 74Combined sources10
Helixi75 – 79Combined sources5
Beta strandi83 – 89Combined sources7
Turni91 – 93Combined sources3
Beta strandi94 – 96Combined sources3
Beta strandi97 – 102Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1BFOX-ray2.60A/C/E/G1-106[»]
1C5DX-ray2.40A/L1-106[»]
1FN4X-ray2.80A/C4-106[»]
1LK3X-ray1.91L/M1-103[»]
4UAOX-ray3.10B1-106[»]
ProteinModelPortaliP01835.
SMRiP01835.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01835.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 102Ig-likeAdd BLAST98

Keywords - Domaini

Immunoglobulin C region, Immunoglobulin domain

Phylogenomic databases

eggNOGiENOG410J107. Eukaryota.
ENOG41115Q6. LUCA.
HOVERGENiHBG039526.
InParanoidiP01835.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003006. Ig/MHC_CS.
IPR003597. Ig_C1-set.
PfamiView protein in Pfam
PF07654. C1-set. 1 hit.
SMARTiView protein in SMART
SM00407. IGc1. 1 hit.
SUPFAMiSSF48726. SSF48726. 1 hit.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 1 hit.
PS00290. IG_MHC. 1 hit.

Sequencei

Sequence statusi: Complete.

P01835-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ADAAPTVSIF PPSTEQLATG GASVVCLMNN FYPRDISVKW KIDGTERRDG
60 70 80 90 100
VLDSVTDQDS KDSTYSMSST LSLTKADYES HNLYTCEVVH KTSSSPVVKS

FNRNEC
Length:106
Mass (Da):11,601
Last modified:July 21, 1986 - v1
Checksum:i4CFA7CA820D1CA36
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei11
Sequence conflicti2D → N AA sequence (PubMed:807630).Curated1
Sequence conflicti30N → K AA sequence (PubMed:807630).Curated1
Sequence conflicti48Missing AA sequence (PubMed:807630).Curated1
Sequence conflicti79E → Q AA sequence (PubMed:807630).Curated1
Sequence conflicti87E → Q AA sequence (PubMed:807630).Curated1
Sequence conflicti98V → VW AA sequence (PubMed:807630).Curated1
Sequence conflicti100S → N AA sequence (PubMed:807630).Curated1

Sequence databases

PIRiA93901. K1RTB.
UniGeneiRn.126980.

Similar proteinsi

Entry informationi

Entry nameiKACB_RAT
AccessioniPrimary (citable) accession number: P01835
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: August 30, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references