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P01823 (HVM47_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ig heavy chain V region 36-60
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length113 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

This chain was isolated from an antiarsonate monoclonal antibody of the IgG2a subclass. It represents a second idiotype family characteristic of the antiarsonate response of strain A/J mice.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – ›113›113Ig heavy chain V region 36-60
PRO_0000059896

Experimental info

Non-terminal residue1131

Secondary structure

........................... 113
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P01823 [UniParc].

Last modified July 21, 1986. Version 1.
Checksum: 38DC0E0E3F5075B7

FASTA11312,734
        10         20         30         40         50         60 
EVQLQESGPS LVKPSQTLSL TCSVTGDSIT SDYWNWIRKF PGNKLEHMGY ISYSGSTYYN 

        70         80         90        100        110 
PSLKSRISIT RDTSKNQYYL QLNSVTSEDT ATYYCTSLRF AYWGQGTLVT VSA 

« Hide

References

[1]"Amino acid sequence of the heavy chain variable region from the A/J mouse anti-arsonate monoclonal antibody 36-60 bearing a minor idiotype."
Juszczak E.C., Margolies M.N.
Biochemistry 22:4291-4296(1983) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE.
Strain: A/J.
+Additional computationally mapped references.

Cross-references

Sequence databases

PIRG2MS60. A02098.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1C08X-ray2.30B2-113[»]
1IC4X-ray2.50H2-113[»]
1IC5X-ray2.30H2-113[»]
1IC7X-ray2.10H2-113[»]
1J1OX-ray1.80H2-113[»]
1J1PX-ray1.80H2-113[»]
1J1XX-ray1.80H2-113[»]
2DQCX-ray1.80H2-113[»]
2DQDX-ray1.80H2-113[»]
2DQEX-ray1.90H2-113[»]
2DQFX-ray2.50B/E2-113[»]
2DQGX-ray2.30H2-113[»]
2DQHX-ray2.30H2-113[»]
2DQIX-ray2.00H2-113[»]
2DQJX-ray1.80H2-113[»]
4CKDelectron microscopy13.00H/I/J/K2-113[»]
ProteinModelPortalP01823.
SMRP01823. Positions 1-113.
ModBaseSearch...
MobiDBSearch...

PTM databases

PhosphoSiteP01823.

Proteomic databases

PRIDEP01823.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGNOG265175.
HOVERGENHBG018013.

Gene expression databases

GenevestigatorP01823.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamPF07686. V-set. 1 hit.
[Graphical view]
SMARTSM00406. IGv. 1 hit.
[Graphical view]
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP01823.

Entry information

Entry nameHVM47_MOUSE
AccessionPrimary (citable) accession number: P01823
Entry history
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: June 11, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references