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Protein

Ig heavy chain V region 36-60

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Ig heavy chain V region 36-60
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – ›113›113Ig heavy chain V region 36-60PRO_0000059896Add
BLAST

Proteomic databases

PRIDEiP01823.

PTM databases

PhosphoSiteiP01823.

Structurei

Secondary structure

1
113
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi3 – 86Combined sources
Beta strandi10 – 123Combined sources
Beta strandi18 – 2710Combined sources
Helixi29 – 313Combined sources
Beta strandi34 – 407Combined sources
Turni41 – 433Combined sources
Beta strandi44 – 518Combined sources
Beta strandi57 – 593Combined sources
Helixi61 – 633Combined sources
Beta strandi67 – 726Combined sources
Turni73 – 764Combined sources
Beta strandi77 – 826Combined sources
Helixi87 – 893Combined sources
Beta strandi91 – 977Combined sources
Beta strandi107 – 1115Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1C08X-ray2.30B2-113[»]
1IC4X-ray2.50H2-113[»]
1IC5X-ray2.30H2-113[»]
1IC7X-ray2.10H2-113[»]
1J1OX-ray1.80H2-113[»]
1J1PX-ray1.80H2-113[»]
1J1XX-ray1.80H2-113[»]
2DQCX-ray1.80H2-113[»]
2DQDX-ray1.80H2-113[»]
2DQEX-ray1.90H2-113[»]
2DQFX-ray2.50B/E2-113[»]
2DQGX-ray2.30H2-113[»]
2DQHX-ray2.30H2-113[»]
2DQIX-ray2.00H2-113[»]
2DQJX-ray1.80H2-113[»]
4CKDelectron microscopy13.00H/I/J/K2-113[»]
ProteinModelPortaliP01823.
SMRiP01823. Positions 1-113.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01823.

Family & Domainsi

Keywords - Domaini

Immunoglobulin domain, Immunoglobulin V region

Phylogenomic databases

eggNOGiNOG265175.
HOVERGENiHBG018013.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00406. IGv. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P01823-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EVQLQESGPS LVKPSQTLSL TCSVTGDSIT SDYWNWIRKF PGNKLEHMGY
60 70 80 90 100
ISYSGSTYYN PSLKSRISIT RDTSKNQYYL QLNSVTSEDT ATYYCTSLRF
110
AYWGQGTLVT VSA
Length:113
Mass (Da):12,734
Last modified:July 21, 1986 - v1
Checksum:i38DC0E0E3F5075B7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei113 – 1131

Sequence databases

PIRiA02098. G2MS60.

Cross-referencesi

Sequence databases

PIRiA02098. G2MS60.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1C08X-ray2.30B2-113[»]
1IC4X-ray2.50H2-113[»]
1IC5X-ray2.30H2-113[»]
1IC7X-ray2.10H2-113[»]
1J1OX-ray1.80H2-113[»]
1J1PX-ray1.80H2-113[»]
1J1XX-ray1.80H2-113[»]
2DQCX-ray1.80H2-113[»]
2DQDX-ray1.80H2-113[»]
2DQEX-ray1.90H2-113[»]
2DQFX-ray2.50B/E2-113[»]
2DQGX-ray2.30H2-113[»]
2DQHX-ray2.30H2-113[»]
2DQIX-ray2.00H2-113[»]
2DQJX-ray1.80H2-113[»]
4CKDelectron microscopy13.00H/I/J/K2-113[»]
ProteinModelPortaliP01823.
SMRiP01823. Positions 1-113.
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSiteiP01823.

Proteomic databases

PRIDEiP01823.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG265175.
HOVERGENiHBG018013.

Miscellaneous databases

EvolutionaryTraceiP01823.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
[Graphical view]
PfamiPF07686. V-set. 1 hit.
[Graphical view]
SMARTiSM00406. IGv. 1 hit.
[Graphical view]
PROSITEiPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Amino acid sequence of the heavy chain variable region from the A/J mouse anti-arsonate monoclonal antibody 36-60 bearing a minor idiotype."
    Juszczak E.C., Margolies M.N.
    Biochemistry 22:4291-4296(1983) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE.
    Strain: A/J.

Entry informationi

Entry nameiHVM47_MOUSE
AccessioniPrimary (citable) accession number: P01823
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: June 24, 2015
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

This chain was isolated from an antiarsonate monoclonal antibody of the IgG2a subclass. It represents a second idiotype family characteristic of the antiarsonate response of strain A/J mice.

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.