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P01808 (HVM38_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified January 22, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ig heavy chain V region T601
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length119 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

This chain was isolated from an IgA myeloma protein that binds galactan.

Sequence similarities

Contains 1 Ig-like (immunoglobulin-like) domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – ›119›119Ig heavy chain V region T601
PRO_0000059891

Regions

Domain1 – 112112Ig-like

Experimental info

Non-terminal residue1191

Secondary structure

.............................. 119
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P01808 [UniParc].

Last modified July 21, 1986. Version 1.
Checksum: BC38CC84E6EA00E8

FASTA11913,169
        10         20         30         40         50         60 
EVKLLESGGG LVQPGGSLKL SCAASGFDFS RYWMSWVRQA PGKGLEWIGE INPDSSTINY 

        70         80         90        100        110 
TPSLKDKFII SRDNAKNTLY LQMSKVRSED TALYYCARLG YYGYFDVWGA GTTVTVSSE 

« Hide

References

[1]"Structural evidence for independent joining region gene in immunoglobulin heavy chains from anti-galactan myeloma proteins and its potential role in generating diversity in complementarity-determining regions."
Rao D.N., Rudikoff S., Krutzsch H., Potter M.
Proc. Natl. Acad. Sci. U.S.A. 76:2890-2894(1979) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

PIRAVMST6. A02078.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1OTSX-ray2.51C/E1-118[»]
1OTTX-ray3.00C/E1-118[»]
1OTUX-ray3.30C/E1-118[»]
2EXWX-ray3.20C/E1-118[»]
2EXYX-ray3.10C/E1-118[»]
2EZ0X-ray3.54C/E1-118[»]
2H2PX-ray3.10C/E2-118[»]
2H2SX-ray3.10C/E2-118[»]
2HLFX-ray3.30C/E2-118[»]
2HT2X-ray3.32C/E2-118[»]
2HT3X-ray3.30C/E2-118[»]
2HT4X-ray3.20C/E2-118[»]
2HTKX-ray3.41C/E2-118[»]
2HTLX-ray3.40C/E2-118[»]
3DETX-ray2.80C/E2-118[»]
3EJYX-ray3.20C/E2-118[»]
3EJZX-ray2.90C/E2-118[»]
3U0WX-ray2.00H1-118[»]
ProteinModelPortalP01808.
SMRP01808. Positions 1-118.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEP01808.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:96461. Igh-J.

Phylogenomic databases

HOVERGENHBG018013.

Gene expression databases

GenevestigatorP01808.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
InterProIPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR013106. Ig_V-set.
IPR003596. Ig_V-set_subgr.
[Graphical view]
PfamPF07686. V-set. 1 hit.
[Graphical view]
SMARTSM00406. IGv. 1 hit.
[Graphical view]
PROSITEPS50835. IG_LIKE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP01808.
NextBio35563506.

Entry information

Entry nameHVM38_MOUSE
AccessionPrimary (citable) accession number: P01808
Entry history
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: January 22, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot