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Protein

Ig heavy chain V-III region J606

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

This chain was isolated from a myeloma protein that binds inulin.

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Ig heavy chain V-III region J606
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000598861 – ›115Ig heavy chain V-III region J606Add BLAST›115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi22 ↔ 98PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

MaxQBiP01801
PRIDEiP01801

Interactioni

Protein-protein interaction databases

MINTiP01801

Structurei

Secondary structure

1115
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 7Combined sources5
Beta strandi10 – 12Combined sources3
Beta strandi18 – 27Combined sources10
Helixi29 – 31Combined sources3
Beta strandi33 – 40Combined sources8
Turni41 – 43Combined sources3
Beta strandi44 – 51Combined sources8
Helixi54 – 56Combined sources3
Beta strandi60 – 62Combined sources3
Turni64 – 69Combined sources6
Beta strandi70 – 75Combined sources6
Turni76 – 79Combined sources4
Beta strandi80 – 85Combined sources6
Helixi90 – 92Combined sources3
Beta strandi94 – 102Combined sources9
Beta strandi103 – 105Combined sources3
Beta strandi109 – 113Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1M71X-ray2.80B1-114[»]
1M7DX-ray2.30B1-114[»]
1M7IX-ray2.50B1-114[»]
1PZ5X-ray1.80B1-114[»]
1SM3X-ray1.95H2-114[»]
2DLFX-ray1.55H1-115[»]
5A2IX-ray1.88H6-99[»]
H102-115[»]
5A2JX-ray1.65H6-115[»]
5A2KX-ray1.70H6-99[»]
H102-115[»]
5A2LX-ray1.79H6-115[»]
5OWPX-ray1.85H6-111[»]
ProteinModelPortaliP01801
SMRiP01801
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01801

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 114Ig-likeAdd BLAST114

Keywords - Domaini

Immunoglobulin domain, Immunoglobulin V region

Phylogenomic databases

HOVERGENiHBG018013

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00406 IGv, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit

Sequencei

Sequence statusi: Complete.

P01801-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
EVKLEESGGG LVQPGGSMKL SCVASGFTFS NYWMNWVRQS PEKGLEWVAE
60 70 80 90 100
IRLKSNNYAT HYAESVKGRF TISRDDSKSS VYLQMNNLRA EDTGIYYCTT
110
GFAYWGQGTL VTVSA
Length:115
Mass (Da):12,810
Last modified:July 21, 1986 - v1
Checksum:iB67AD6638A121A5F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1151

Sequence databases

PIRiC92811 AVMS06
UniGeneiMm.422809
Mm.431322

Similar proteinsi

Entry informationi

Entry nameiHVM32_MOUSE
AccessioniPrimary (citable) accession number: P01801
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: May 23, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

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