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P01738

- TVA1_MOUSE

UniProt

P01738 - TVA1_MOUSE

Protein

T-cell receptor alpha chain V region PHDS58

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Keywords - Molecular functioni

    Receptor

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    T-cell receptor alpha chain V region PHDS58
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Unplaced

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020Add
    BLAST
    Chaini21 – 130110T-cell receptor alpha chain V region PHDS58PRO_0000033591Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi90 – 901N-linked (GlcNAc...)

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PRIDEiP01738.

    Expressioni

    Gene expression databases

    GenevestigatoriP01738.

    Interactioni

    Protein-protein interaction databases

    MINTiMINT-1520010.

    Structurei

    Secondary structure

    1
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi22 – 243
    Beta strandi28 – 336
    Beta strandi38 – 403
    Beta strandi43 – 453
    Beta strandi52 – 576
    Beta strandi59 – 613
    Beta strandi64 – 696
    Beta strandi74 – 774
    Helixi79 – 813
    Beta strandi82 – 876
    Turni88 – 914
    Beta strandi92 – 998
    Helixi102 – 1043
    Beta strandi106 – 1138
    Helixi115 – 1173
    Beta strandi119 – 1213
    Beta strandi125 – 1306

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1G6RX-ray2.80A/C21-130[»]
    1I9EX-ray2.50A21-130[»]
    1MWAX-ray2.40A/C21-130[»]
    1TCRX-ray2.50A21-130[»]
    2CKBX-ray3.00A/C21-130[»]
    2ICWX-ray2.41I/K21-130[»]
    2OI9X-ray2.35B21-130[»]
    3E2HX-ray3.80B22-130[»]
    3E3QX-ray2.95C/D/I/M/R/V/Z/d22-130[»]
    ProteinModelPortaliP01738.
    SMRiP01738. Positions 21-130.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP01738.

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni21 – 11494V segmentAdd
    BLAST
    Regioni115 – 13016J segmentAdd
    BLAST

    Keywords - Domaini

    Immunoglobulin domain, Signal

    Phylogenomic databases

    eggNOGiNOG42093.
    HOGENOMiHOG000294099.
    HOVERGENiHBG105972.
    InParanoidiP01738.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    InterProiIPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view]
    PfamiPF07686. V-set. 1 hit.
    [Graphical view]
    SMARTiSM00406. IGv. 1 hit.
    [Graphical view]
    PROSITEiPS50835. IG_LIKE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P01738-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLLALLPVLG IHFVLRDAQA QSVTQPDARV TVSEGASLQL RCKYSYSATP    50
    YLFWYVQYPR QGLQLLLKYY SGDPVVQGVN GFEAEFSKSN SSFHLRKASV 100
    HWSDSAVYFC AVSGFASALT FGSGTKVIVL 130
    Length:130
    Mass (Da):14,320
    Last modified:July 21, 1986 - v1
    Checksum:i19E638A8EEBFA635
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei130 – 1301

    Sequence databases

    PIRiA02012. RWMS58.
    UniGeneiMm.446617.
    Mm.453040.

    Genome annotation databases

    UCSCiuc007tqj.2. mouse.

    Cross-referencesi

    Sequence databases

    PIRi A02012. RWMS58.
    UniGenei Mm.446617.
    Mm.453040.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1G6R X-ray 2.80 A/C 21-130 [» ]
    1I9E X-ray 2.50 A 21-130 [» ]
    1MWA X-ray 2.40 A/C 21-130 [» ]
    1TCR X-ray 2.50 A 21-130 [» ]
    2CKB X-ray 3.00 A/C 21-130 [» ]
    2ICW X-ray 2.41 I/K 21-130 [» ]
    2OI9 X-ray 2.35 B 21-130 [» ]
    3E2H X-ray 3.80 B 22-130 [» ]
    3E3Q X-ray 2.95 C/D/I/M/R/V/Z/d 22-130 [» ]
    ProteinModelPortali P01738.
    SMRi P01738. Positions 21-130.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    MINTi MINT-1520010.

    Proteomic databases

    PRIDEi P01738.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    UCSCi uc007tqj.2. mouse.

    Phylogenomic databases

    eggNOGi NOG42093.
    HOGENOMi HOG000294099.
    HOVERGENi HBG105972.
    InParanoidi P01738.

    Miscellaneous databases

    EvolutionaryTracei P01738.

    Gene expression databases

    Genevestigatori P01738.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    InterProi IPR007110. Ig-like_dom.
    IPR013783. Ig-like_fold.
    IPR013106. Ig_V-set.
    IPR003596. Ig_V-set_subgr.
    [Graphical view ]
    Pfami PF07686. V-set. 1 hit.
    [Graphical view ]
    SMARTi SM00406. IGv. 1 hit.
    [Graphical view ]
    PROSITEi PS50835. IG_LIKE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A third rearranged and expressed gene in a clone of cytotoxic T lymphocytes."
      Saito H., Kranz D.M., Takagaki Y., Hayday A.C., Eisen H.N., Tonegawa S.
      Nature 312:36-40(1984) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BALB.B.

    Entry informationi

    Entry nameiTVA1_MOUSE
    AccessioniPrimary (citable) accession number: P01738
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 21, 1986
    Last sequence update: July 21, 1986
    Last modified: June 11, 2014
    This is version 94 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    This clone was isolated from a cytotoxic T lymphocyte.

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references

    External Data

    Dasty 3