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Protein

T-cell receptor alpha chain V region PHDS58

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

This clone was isolated from a cytotoxic T lymphocyte.

Keywordsi

Molecular functionReceptor

Names & Taxonomyi

Protein namesi
Recommended name:
T-cell receptor alpha chain V region PHDS58
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Add BLAST20
ChainiPRO_000003359121 – 130T-cell receptor alpha chain V region PHDS58Add BLAST110

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi90N-linked (GlcNAc...) asparagine1

Keywords - PTMi

Glycoprotein

Proteomic databases

PRIDEiP01738

Interactioni

Protein-protein interaction databases

MINTiP01738

Structurei

Secondary structure

1130
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi22 – 24Combined sources3
Beta strandi28 – 33Combined sources6
Beta strandi38 – 40Combined sources3
Beta strandi43 – 45Combined sources3
Beta strandi52 – 57Combined sources6
Beta strandi59 – 61Combined sources3
Beta strandi64 – 69Combined sources6
Beta strandi74 – 77Combined sources4
Helixi79 – 81Combined sources3
Beta strandi82 – 87Combined sources6
Turni88 – 91Combined sources4
Beta strandi92 – 99Combined sources8
Helixi102 – 104Combined sources3
Beta strandi106 – 113Combined sources8
Helixi115 – 117Combined sources3
Beta strandi119 – 121Combined sources3
Beta strandi125 – 130Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1G6RX-ray2.80A/C21-130[»]
1I9EX-ray2.50A21-130[»]
1MWAX-ray2.40A/C21-130[»]
1TCRX-ray2.50A21-130[»]
2CKBX-ray3.00A/C21-130[»]
2ICWX-ray2.41I/K21-130[»]
2OI9X-ray2.35B21-130[»]
3E2HX-ray3.80B22-130[»]
3E3QX-ray2.95C/D/I/M/R/V/Z/d22-130[»]
4MVBX-ray3.09C20-129[»]
4MXQX-ray2.60C20-113[»]
4N0CX-ray2.90C/G20-129[»]
4N5EX-ray3.06C20-113[»]
4NHUX-ray2.90A/C21-130[»]
ProteinModelPortaliP01738
SMRiP01738
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01738

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni21 – 114V segmentAdd BLAST94
Regioni115 – 130J segmentAdd BLAST16

Keywords - Domaini

Immunoglobulin domain, Signal

Phylogenomic databases

HOGENOMiHOG000294099
HOVERGENiHBG105972

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00406 IGv, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P01738-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLALLPVLG IHFVLRDAQA QSVTQPDARV TVSEGASLQL RCKYSYSATP
60 70 80 90 100
YLFWYVQYPR QGLQLLLKYY SGDPVVQGVN GFEAEFSKSN SSFHLRKASV
110 120 130
HWSDSAVYFC AVSGFASALT FGSGTKVIVL
Length:130
Mass (Da):14,320
Last modified:July 21, 1986 - v1
Checksum:i19E638A8EEBFA635
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1301

Sequence databases

PIRiA02012 RWMS58
UniGeneiMm.446617
Mm.453040

Similar proteinsi

Entry informationi

Entry nameiTVA1_MOUSE
AccessioniPrimary (citable) accession number: P01738
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: May 23, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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