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Protein

Ig lambda-1 chain V regions MOPC 104E/RPC20/J558/S104

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Compositions and partial sequences of RPC 20 show no differences from MOPC 104E. The sequences of J558 and S104 seems identical with that shown.
These proteins were isolated from serum or urine of tumor-bearing mice.

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Ig lambda-1 chain V regions MOPC 104E/RPC20/J558/S104
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 193 PublicationsAdd BLAST19
ChainiPRO_000001520220 – 129Ig lambda-1 chain V regions MOPC 104E/RPC20/J558/S104Add BLAST110

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei20Pyrrolidone carboxylic acid1 Publication1

Keywords - PTMi

Pyrrolidone carboxylic acid

Proteomic databases

MaxQBiP01724
PRIDEiP01724

Interactioni

Protein-protein interaction databases

MINTiP01724

Structurei

Secondary structure

1129
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi23 – 25Combined sources3
Beta strandi27 – 31Combined sources5
Beta strandi36 – 43Combined sources8
Beta strandi44 – 46Combined sources3
Helixi50 – 52Combined sources3
Beta strandi55 – 60Combined sources6
Turni61 – 63Combined sources3
Beta strandi64 – 70Combined sources7
Turni71 – 73Combined sources3
Beta strandi83 – 88Combined sources6
Beta strandi91 – 98Combined sources8
Helixi101 – 103Combined sources3
Beta strandi105 – 113Combined sources9
Beta strandi116 – 119Combined sources4
Beta strandi123 – 127Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1A6UX-ray2.10L21-128[»]
1A6VX-ray1.80L/M/N20-128[»]
1A6WX-ray2.00L21-128[»]
1DL7X-ray2.35L20-128[»]
1OAQX-ray1.50L20-129[»]
1OARX-ray2.23L/M/N/O20-128[»]
1OAUX-ray1.80L/M/N/O20-128[»]
1OAXX-ray2.67L/M/N/O20-128[»]
1OAYX-ray2.66L/M/N/O20-128[»]
1OAZX-ray2.78L/N20-128[»]
1OCWX-ray2.00L20-128[»]
1Q0YX-ray2.00L21-129[»]
2BJMX-ray2.15L20-128[»]
ProteinModelPortaliP01724
SMRiP01724
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP01724

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 125Ig-likeAdd BLAST106

Keywords - Domaini

Immunoglobulin domain, Immunoglobulin V region, Signal

Phylogenomic databases

HOGENOMiHOG000059537
HOVERGENiHBG018013
PhylomeDBiP01724

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003599 Ig_sub
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00409 IG, 1 hit
SM00406 IGv, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P01724-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWISLILSL LALSSGAISQ AVVTQESALT TSPGETVTLT CRSSTGAVTT
60 70 80 90 100
SNYANWVQQK PDHLFTGLIG GTNNRAPGVP ARFSGSLIGN KAALTITGAQ
110 120
TEDEAIYFCA LWYSNHWVFG GGTKLTVLG
Length:129
Mass (Da):13,479
Last modified:July 21, 1986 - v1
Checksum:i03629939D5791AC0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1291

Sequence databases

PIRiB93815 L1MS4E
PH1089
UniGeneiMm.326349
Mm.456234
Mm.469795

Similar proteinsi

Entry informationi

Entry nameiLV1B_MOUSE
AccessioniPrimary (citable) accession number: P01724
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: May 23, 2018
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

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