P01567 (IFNA7_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Interferon alpha-7
Short name=IFN-alpha-7

Alternative name(s):
Interferon alpha-J
Short name=LeIF J
Interferon alpha-J1
Short name=IFN-alpha-J1

Gene names

Name:

IFNA7

Organism

Homo sapiens (Human)

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	189 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Produced by macrophages, IFN-alpha have antiviral activities. Interferon stimulates the production of two enzymes: a protein kinase and an oligoadenylate synthetase.
Subcellular location	Secreted.
Sequence similarities	Belongs to the alpha/beta interferon family.

Ontologies

Keywords
Biological process	Antiviral defense
Cellular component	Secreted
Domain	Signal
Molecular function	Cytokine
PTM	Disulfide bond
Technical term	Complete proteome Direct protein sequencing Reference proteome
Gene Ontology (GO)
Biological process	blood coagulation Traceable author statement. Source: Reactome cell-cell signaling Traceable author statement. Source: ProtInc regulation of type I interferon-mediated signaling pathway Traceable author statement. Source: Reactome response to virus Traceable author statement. Source: ProtInc type I interferon-mediated signaling pathway Traceable author statement. Source: Reactome
Cellular component	extracellular space Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cytokine activity Inferred from electronic annotation. Source: UniProtKB-KW interferon-alpha/beta receptor binding Traceable author statement. Source: ProtInc
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Ref.7
	Chain	24 – 189	166	Interferon alpha-7		PRO_0000016364
Amino acid modifications
	Disulfide bond	24 ↔ 122		By similarity
	Disulfide bond	52 ↔ 162		By similarity
Experimental info
	Sequence conflict	10	1	V → A in AAA36039. Ref.3
	Sequence conflict	155	1	M → T in AAA36039. Ref.3

Sequences

	Sequence		Length	Mass (Da)
	P01567 [UniParc]. Last modified July 21, 1986. Version 1. Checksum: 9DF6F5C81E339A42	FASTA	189	22,107
	10 20 30 40 50 60 MARSFSLLMV VLVLSYKSIC SLGCDLPQTH SLRNRRALIL LAQMGRISPF SCLKDRHEFR 70 80 90 100 110 120 FPEEEFDGHQ FQKTQAISVL HEMIQQTFNL FSTEDSSAAW EQSLLEKFST ELYQQLNDLE 130 140 150 160 170 180 ACVIQEVGVE ETPLMNEDFI LAVRKYFQRI TLYLMEKKYS PCAWEVVRAE IMRSFSFSTN LKKGLRRKD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Nucleotide sequence of a portion of human chromosome 9 containing a leukocyte interferon gene cluster." Ullrich A., Gray A., Goeddel D.V., Dull T.J. J. Mol. Biol. 156:467-486(1982) [PubMed: 6181262] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Structural relationship of human interferon alpha genes and pseudogenes." Henco K., Brosius J., Fujisawa A., Fujisawa J., Haynes J.R., Hochstadt J., Kovacic T., Pasek M., Schamboeck A., Schmid J., Todokoro K., Waelchli M., Nagata S., Weissmann C. J. Mol. Biol. 185:227-260(1985) [PubMed: 4057246] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]	"Cloning, expression and biological activity of a new variant of human interferon alpha identified in virus induced lymphoblastoid cells." Cohen S., Velan B., Grosfeld H., Shalita Z., Leitner M., Shafferman A. Dev. Biol. Stand. 60:111-122(1985) [PubMed: 2995168] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[4]	"DNA sequence and analysis of human chromosome 9." Humphray S.J., Oliver K., Hunt A.R., Plumb R.W., Loveland J.E., Howe K.L., Andrews T.D., Searle S., Hunt S.E., Scott C.E., Jones M.C., Ainscough R., Almeida J.P., Ambrose K.D., Ashwell R.I.S., Babbage A.K., Babbage S., Bagguley C.L. , Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beasley H., Beasley O., Bird C.P., Bray-Allen S., Brown A.J., Brown J.Y., Burford D., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Chen Y., Clarke G., Clark S.Y., Clee C.M., Clegg S., Collier R.E., Corby N., Crosier M., Cummings A.T., Davies J., Dhami P., Dunn M., Dutta I., Dyer L.W., Earthrowl M.E., Faulkner L., Fleming C.J., Frankish A., Frankland J.A., French L., Fricker D.G., Garner P., Garnett J., Ghori J., Gilbert J.G.R., Glison C., Grafham D.V., Gribble S., Griffiths C., Griffiths-Jones S., Grocock R., Guy J., Hall R.E., Hammond S., Harley J.L., Harrison E.S.I., Hart E.A., Heath P.D., Henderson C.D., Hopkins B.L., Howard P.J., Howden P.J., Huckle E., Johnson C., Johnson D., Joy A.A., Kay M., Keenan S., Kershaw J.K., Kimberley A.M., King A., Knights A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C., Lloyd D.M., Lovell J., Martin S., Mashreghi-Mohammadi M., Matthews L., McLaren S., McLay K.E., McMurray A., Milne S., Nickerson T., Nisbett J., Nordsiek G., Pearce A.V., Peck A.I., Porter K.M., Pandian R., Pelan S., Phillimore B., Povey S., Ramsey Y., Rand V., Scharfe M., Sehra H.K., Shownkeen R., Sims S.K., Skuce C.D., Smith M., Steward C.A., Swarbreck D., Sycamore N., Tester J., Thorpe A., Tracey A., Tromans A., Thomas D.W., Wall M., Wallis J.M., West A.P., Whitehead S.L., Willey D.L., Williams S.A., Wilming L., Wray P.W., Young L., Ashurst J.L., Coulson A., Blocker H., Durbin R.M., Sulston J.E., Hubbard T., Jackson M.J., Bentley D.R., Beck S., Rogers J., Dunham I. Nature 429:369-374(2004) [PubMed: 15164053] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[5]	Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[6]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain.
[7]	"Identification of nine interferon-alpha subtypes produced by Sendai virus-induced human peripheral blood leucocytes." Nyman T.A., Toeloe H., Parkkinen J., Kalkkinen N. Biochem. J. 329:295-302(1998) [PubMed: 9425112] [Abstract] Cited for: PROTEIN SEQUENCE OF 24-57.
[8]	"Identification of interferon-alpha 7, -alpha 14, and -alpha 21 variants in the genome of a large human population." Hussain M., Gill D.S., Liao M.-J. J. Interferon Cytokine Res. 16:853-859(1996) [PubMed: 8910771] [Abstract] Cited for: ABSENCE OF POLYMORPHISM.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	V00531 Genomic DNA. Translation: CAA23792.1. X02960 Genomic DNA. Translation: CAA26706.1. M34913 mRNA. Translation: AAA36039.1. AL512606 Genomic DNA. Translation: CAH71190.1. CH471071 Genomic DNA. Translation: EAW58620.1. BC074991 mRNA. Translation: AAH74991.1. BC074992 mRNA. Translation: AAH74992.1. BC113994 mRNA. Translation: AAI13995.1. BC114000 mRNA. Translation: AAI14001.1.
IPI	IPI00003075.
PIR	IVHUA0. A01831. F25843. I53102.
RefSeq	NP_066401.2. NM_021057.2.
UniGene	Hs.282274.
3D structure databases
ProteinModelPortal	P01567.
SMR	P01567. Positions 24-189.
ModBase	Search...
Protein-protein interaction databases
STRING	P01567.
Polymorphism databases
DMDM	124442.
Proteomic databases
PRIDE	P01567.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000239347; ENSP00000239347; ENSG00000214042.
GeneID	3444.
KEGG	hsa:3444.
UCSC	uc003zop.1. human.
Organism-specific databases
CTD	3444.
GeneCards	GC09M021234.
HGNC	HGNC:5428. IFNA7.
MIM	147567. gene.
neXtProt	NX_P01567.
PharmGKB	PA29667.
GenAtlas	Search...
Phylogenomic databases
eggNOG	prNOG09570.
GeneTree	ENSGT00590000082966.
HOGENOM	HBG507173.
HOVERGEN	HBG052086.
InParanoid	P01567.
OMA	EYFHRIS.
OrthoDB	EOG4KKZ45.
Enzyme and pathway databases
Pathway_Interaction_DB	cd8tcrdownstreampathway. Downstream signaling in naive CD8+ T cells.
Reactome	REACT_604. Hemostasis. REACT_6900. Immune System.
Gene expression databases
ArrayExpress	P01567.
Bgee	P01567.
CleanEx	HS_IFNA7.
Genevestigator	P01567.
GermOnline	ENSG00000137026. Homo sapiens.
Family and domain databases
InterPro	IPR009079. 4_helix_cytokine-like_core. IPR012351. 4_helix_cytokine_core. IPR015589. Interferon_alpha. IPR000471. Interferon_alpha/beta/delta. [Graphical view]
Gene3D	G3DSA:1.20.1250.10. 4_helix_cytokine_core. 1 hit.
KO	K05414.
PANTHER	PTHR11691:SF9. IFNa. 1 hit. PTHR11691. Interferon_abd. 1 hit.
Pfam	PF00143. Interferon. 1 hit. [Graphical view]
PRINTS	PR00266. INTERFERONAB.
SMART	SM00076. IFabd. 1 hit. [Graphical view]
SUPFAM	SSF47266. 4_helix_cytokine. 1 hit.
PROSITE	PS00252. INTERFERON_A_B_D. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	13572.
SOURCE	Search...

Entry information

Entry name

IFNA7_HUMAN

Accession

Primary (citable) accession number: P01567
Secondary accession number(s): Q14607, Q5VV14

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 21, 1986
Last sequence update:	July 21, 1986
Last modified:	January 25, 2012
This is version 113 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.