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P00884

- ALDOB_RAT

UniProt

P00884 - ALDOB_RAT

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Protein

Fructose-bisphosphate aldolase B

Gene
Aldob
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561Substrate
Binding sitei147 – 1471Substrate
Active sitei188 – 1881Proton acceptor By similarity
Active sitei230 – 2301Schiff-base intermediate with dihydroxyacetone-P
Sitei364 – 3641Necessary for preference for fructose 1,6-bisphosphate over fructose 1-phosphate

GO - Molecular functioni

  1. fructose-bisphosphate aldolase activity Source: RGD
  2. phosphatidylcholine binding Source: RGD

GO - Biological processi

  1. cellular response to extracellular stimulus Source: RGD
  2. cellular response to insulin stimulus Source: RGD
  3. glycolytic process Source: RGD
  4. liver development Source: RGD
  5. response to amino acid Source: RGD
  6. response to cAMP Source: RGD
  7. response to carbohydrate Source: RGD
  8. response to copper ion Source: RGD
  9. response to drug Source: RGD
  10. response to fructose Source: RGD
  11. response to glucocorticoid Source: RGD
  12. response to interleukin-6 Source: RGD
  13. response to organic cyclic compound Source: RGD
  14. response to peptide hormone Source: RGD
  15. response to starvation Source: RGD
  16. response to zinc ion Source: RGD
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Glycolysis

Keywords - Ligandi

Schiff base

Enzyme and pathway databases

SABIO-RKP00884.
UniPathwayiUPA00109; UER00183.

Names & Taxonomyi

Protein namesi
Recommended name:
Fructose-bisphosphate aldolase B (EC:4.1.2.13)
Alternative name(s):
Liver-type aldolase
Gene namesi
Name:Aldob
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Unplaced

Organism-specific databases

RGDi2090. Aldob.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: RGD
  2. cytosol Source: RGD
  3. intracellular membrane-bounded organelle Source: RGD
  4. lysosome Source: RGD
  5. microtubule organizing center Source: UniProtKB-SubCell
  6. nucleus Source: RGD
  7. perinuclear region of cytoplasm Source: RGD
  8. plasma membrane Source: RGD
  9. rough endoplasmic reticulum membrane Source: RGD
  10. smooth endoplasmic reticulum membrane Source: RGD
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 364363Fructose-bisphosphate aldolase BPRO_0000216943Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine By similarity
Modified residuei13 – 131N6-succinyllysine By similarity
Modified residuei36 – 361Phosphoserine By similarity
Modified residuei39 – 391Phosphothreonine By similarity
Modified residuei121 – 1211N6-succinyllysine By similarity
Modified residuei317 – 3171N6-succinyllysine By similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiP00884.
PRIDEiP00884.

PTM databases

PhosphoSiteiP00884.

Expressioni

Gene expression databases

GenevestigatoriP00884.

Interactioni

Subunit structurei

Homotetramer. Interacts with BBS1, BBS2, BBS4 and BBS7 By similarity.

Protein-protein interaction databases

IntActiP00884. 1 interaction.
MINTiMINT-3376760.

Structurei

Secondary structure

1
364
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi9 – 2315
Helixi24 – 263
Beta strandi28 – 325
Helixi36 – 4611
Helixi52 – 6312
Helixi67 – 715
Beta strandi73 – 786
Helixi80 – 845
Beta strandi88 – 903
Helixi93 – 1008
Beta strandi103 – 1075
Beta strandi111 – 1144
Beta strandi118 – 1203
Beta strandi122 – 1254
Helixi130 – 14011
Beta strandi144 – 1518
Helixi160 – 17920
Beta strandi183 – 1908
Helixi198 – 21821
Helixi223 – 2253
Helixi245 – 25915
Beta strandi266 – 2694
Helixi276 – 28813
Beta strandi295 – 3028
Helixi303 – 31311
Helixi317 – 3193
Helixi320 – 33920
Beta strandi344 – 3463
Beta strandi352 – 3565

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1N30model-A1-364[»]
ProteinModelPortaliP00884.
SMRiP00884. Positions 2-360.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3588.
HOGENOMiHOG000220876.
HOVERGENiHBG002386.
InParanoidiP00884.
PhylomeDBiP00884.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view]
PfamiPF00274. Glycolytic. 1 hit.
[Graphical view]
PROSITEiPS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P00884-1 [UniParc]FASTAAdd to Basket

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MAHRFPALTS EQKKELSEIA QRIVANGKGI LAADESVGTM GNRLQRIKVE    50
NTEENRRQFR ELLFSVDNSI SQSIGGVILF HETLYQKDSQ GKLFRNILKE 100
KGIVVGIKLD QGGAPLAGTN KETTIQGLDG LSERCAQYKK DGVDFGKWRA 150
VLRISDQCPS SLAIQENANA LARYASICQQ NGLVPIVEPE VLPDGDHDLE 200
HCQYVSEKVL AAVYKALNDH HVYLEGTLLK PNMLTAGHAC TKKYTPEQVA 250
MATVTALHRT VPAAVPSICF LSGGMSEEDA TLNLNAIYRC PLPRPWKLSF 300
SYGRALQASA LAAWGGKAAN KKATQEAFMK RAVANCQAAQ GQYVHTGSSG 350
AASTQSLFTA SYTY 364
Length:364
Mass (Da):39,618
Last modified:January 23, 2007 - v2
Checksum:iE120FC119F0180F8
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti234 – 2341L → V in CAA26156. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M10149 mRNA. Translation: AAA40716.1.
X02284
, X02285, X02286, X02287, X02288, X02289, X02290, X02291 Genomic DNA. Translation: CAA26156.1.
V01223 mRNA. Translation: CAA24533.1.
PIRiA22585. ADRTB.
UniGeneiRn.98207.

Genome annotation databases

UCSCiRGD:2090. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M10149 mRNA. Translation: AAA40716.1 .
X02284
, X02285 , X02286 , X02287 , X02288 , X02289 , X02290 , X02291 Genomic DNA. Translation: CAA26156.1 .
V01223 mRNA. Translation: CAA24533.1 .
PIRi A22585. ADRTB.
UniGenei Rn.98207.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1N30 model - A 1-364 [» ]
ProteinModelPortali P00884.
SMRi P00884. Positions 2-360.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi P00884. 1 interaction.
MINTi MINT-3376760.

PTM databases

PhosphoSitei P00884.

Proteomic databases

PaxDbi P00884.
PRIDEi P00884.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

UCSCi RGD:2090. rat.

Organism-specific databases

RGDi 2090. Aldob.

Phylogenomic databases

eggNOGi COG3588.
HOGENOMi HOG000220876.
HOVERGENi HBG002386.
InParanoidi P00884.
PhylomeDBi P00884.

Enzyme and pathway databases

UniPathwayi UPA00109 ; UER00183 .
SABIO-RK P00884.

Gene expression databases

Genevestigatori P00884.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view ]
Pfami PF00274. Glycolytic. 1 hit.
[Graphical view ]
PROSITEi PS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Nucleotide sequence of rat liver aldolase B messenger RNA."
    Tsutsumi K., Mukai T., Tsutsumi R., Mori M., Daimon M., Tanaka T., Yatsuki H., Hori K., Ishikawa K.
    J. Biol. Chem. 259:14572-14575(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "Structure and genomic organization of the rat aldolase B gene."
    Tsutsumi K., Mukai T., Tsutsumi R., Hidaka S., Arai Y., Hori K., Ishikawa K.
    J. Mol. Biol. 181:153-160(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: Sprague-Dawley.
  3. "Rat aldolase isozyme gene."
    Tsutsumi K., Mukai T., Hidaka S., Miyahara H., Tsutsumi R., Tanaka T., Hori K., Ishikawa K.
    J. Biol. Chem. 258:6537-6542(1983) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE OF 185-364.
  4. "Key enzymes of carbohydrate metabolism as targets of the 11.5-kDa Zn(2+)-binding protein (parathymosin)."
    Brand I.A., Heinickel A.
    J. Biol. Chem. 266:20984-20989(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 41-68.

Entry informationi

Entry nameiALDOB_RAT
AccessioniPrimary (citable) accession number: P00884
Secondary accession number(s): P70706
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: January 23, 2007
Last modified: September 3, 2014
This is version 121 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

In vertebrates, 3 forms of this ubiquitous glycolytic enzyme are found, aldolase A in muscle, aldolase B in liver and aldolase C in brain.

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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