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P00299

- PLAS1_POPNI

UniProt

P00299 - PLAS1_POPNI

Protein

Plastocyanin A, chloroplastic

Gene

PETE

Organism
Populus nigra (Lombardy poplar)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi106 – 1061Copper
    Metal bindingi153 – 1531Copper
    Metal bindingi156 – 1561Copper
    Metal bindingi161 – 1611Copper

    GO - Molecular functioni

    1. copper ion binding Source: InterPro
    2. electron carrier activity Source: InterPro

    GO - Biological processi

    1. oxidation-reduction process Source: UniProtKB-KW

    Keywords - Biological processi

    Electron transport, Transport

    Keywords - Ligandi

    Copper, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Plastocyanin A, chloroplastic
    Gene namesi
    Name:PETE
    OrganismiPopulus nigra (Lombardy poplar)
    Taxonomic identifieri3691 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

    Subcellular locationi

    Plastidchloroplast thylakoid membrane; Peripheral membrane protein; Lumenal side
    Note: Loosely bound to the inner thylakoid membrane surface in chloroplasts.

    GO - Cellular componenti

    1. chloroplast thylakoid membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Membrane, Plastid, Thylakoid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 6969Chloroplast1 PublicationAdd
    BLAST
    Chaini70 – 16899Plastocyanin A, chloroplasticPRO_0000002893Add
    BLAST

    Structurei

    Secondary structure

    1
    168
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi71 – 755
    Beta strandi83 – 908
    Beta strandi95 – 1006
    Helixi112 – 1143
    Helixi121 – 1233
    Beta strandi138 – 1425
    Beta strandi147 – 1526
    Helixi154 – 1563
    Turni157 – 1604
    Beta strandi162 – 1676

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1JXGX-ray1.60A/B70-168[»]
    1PLCX-ray1.33A70-168[»]
    1PNCX-ray1.60A70-168[»]
    1PNDX-ray1.60A70-168[»]
    1TKWNMR-A70-168[»]
    2PCYX-ray1.80A70-168[»]
    3PCYX-ray1.90A70-168[»]
    4DP7X-ray1.08X70-168[»]
    4DP8X-ray1.07X70-168[»]
    4DP9X-ray1.00X70-168[»]
    4DPAX-ray1.05X70-168[»]
    4DPBX-ray1.00X70-168[»]
    4DPCX-ray1.06X70-168[»]
    4PCYX-ray2.15A70-168[»]
    5PCYX-ray1.80A70-168[»]
    6PCYX-ray1.90A70-168[»]
    ProteinModelPortaliP00299.
    SMRiP00299. Positions 70-168.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP00299.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini70 – 16899Plastocyanin-likeAdd
    BLAST

    Sequence similaritiesi

    Contains 1 plastocyanin-like domain.Curated

    Keywords - Domaini

    Transit peptide

    Family and domain databases

    Gene3Di2.60.40.420. 1 hit.
    InterProiIPR000923. BlueCu_1.
    IPR028871. BlueCu_1_BS.
    IPR001235. Copper_blue_Plastocyanin.
    IPR008972. Cupredoxin.
    IPR002387. Plastocyanin.
    [Graphical view]
    PfamiPF00127. Copper-bind. 1 hit.
    [Graphical view]
    PRINTSiPR00156. COPPERBLUE.
    PR00157. PLASTOCYANIN.
    SUPFAMiSSF49503. SSF49503. 1 hit.
    TIGRFAMsiTIGR02656. cyanin_plasto. 1 hit.
    PROSITEiPS00196. COPPER_BLUE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P00299-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATVTSAAVS IPSFTGLKAG SASNAKVSAS AKVSASPLPR LSIKASMKDV    50
    GAAVVATAAS AMIASNAMAI DVLLGADDGS LAFVPSEFSI SPGEKIVFKN 100
    NAGFPHNIVF DEDSIPSGVD ASKISMSEED LLNAKGETFE VALSNKGEYS 150
    FYCSPHQGAG MVGKVTVN 168
    Length:168
    Mass (Da):17,020
    Last modified:October 1, 1996 - v2
    Checksum:i901B21A7573DBF82
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50185 mRNA. Translation: CAA90564.1.
    PIRiS58209. CUPX.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z50185 mRNA. Translation: CAA90564.1 .
    PIRi S58209. CUPX.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1JXG X-ray 1.60 A/B 70-168 [» ]
    1PLC X-ray 1.33 A 70-168 [» ]
    1PNC X-ray 1.60 A 70-168 [» ]
    1PND X-ray 1.60 A 70-168 [» ]
    1TKW NMR - A 70-168 [» ]
    2PCY X-ray 1.80 A 70-168 [» ]
    3PCY X-ray 1.90 A 70-168 [» ]
    4DP7 X-ray 1.08 X 70-168 [» ]
    4DP8 X-ray 1.07 X 70-168 [» ]
    4DP9 X-ray 1.00 X 70-168 [» ]
    4DPA X-ray 1.05 X 70-168 [» ]
    4DPB X-ray 1.00 X 70-168 [» ]
    4DPC X-ray 1.06 X 70-168 [» ]
    4PCY X-ray 2.15 A 70-168 [» ]
    5PCY X-ray 1.80 A 70-168 [» ]
    6PCY X-ray 1.90 A 70-168 [» ]
    ProteinModelPortali P00299.
    SMRi P00299. Positions 70-168.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei P00299.

    Family and domain databases

    Gene3Di 2.60.40.420. 1 hit.
    InterProi IPR000923. BlueCu_1.
    IPR028871. BlueCu_1_BS.
    IPR001235. Copper_blue_Plastocyanin.
    IPR008972. Cupredoxin.
    IPR002387. Plastocyanin.
    [Graphical view ]
    Pfami PF00127. Copper-bind. 1 hit.
    [Graphical view ]
    PRINTSi PR00156. COPPERBLUE.
    PR00157. PLASTOCYANIN.
    SUPFAMi SSF49503. SSF49503. 1 hit.
    TIGRFAMsi TIGR02656. cyanin_plasto. 1 hit.
    PROSITEi PS00196. COPPER_BLUE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Reichert J., Jenzelewski V., Haehnel W.
      Submitted (AUG-1995) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Italica.
      Tissue: Leaf.
    2. "Elegance in molecular design: the copper site of photosynthetic electron-transfer protein."
      Freeman H.C.
      J. Proc. Royal Soc. N.S. Wales 112:45-62(1979)
      Cited for: PROTEIN SEQUENCE OF 70-168.
      Strain: cv. Italica.
    3. "The crystal structure of poplar apoplastocyanin at 1.8-A resolution. The geometry of the copper-binding site is created by the polypeptide."
      Garrett T.P.J., Clingeleffer D.J., Guss J.M., Rogers S.J., Freeman H.C.
      J. Biol. Chem. 259:2822-2825(1984) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS).
    4. "Structure of oxidized poplar plastocyanin at 1.6-A resolution."
      Guss J.M., Freeman H.C.
      J. Mol. Biol. 169:521-563(1983) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS).
    5. "X-ray crystal structure analysis of plastocyanin at 2.7-A resolution."
      Colman P.M., Freeman H.C., Guss J.M., Murata M., Norris V.A., Ramshaw J.A.M., Venkatappa M.P.
      Nature 272:319-324(1978)
      Cited for: X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS).

    Entry informationi

    Entry nameiPLAS1_POPNI
    AccessioniPrimary (citable) accession number: P00299
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 21, 1986
    Last sequence update: October 1, 1996
    Last modified: October 1, 2014
    This is version 104 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Direct protein sequencing

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3