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P00227 (FER_BRANA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ferredoxin
OrganismBrassica napus (Rape)
Taxonomic identifier3708 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Protein attributes

Sequence length96 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactor

Binds 1 2Fe-2S cluster.

Subcellular location

Plastidchloroplast.

Sequence similarities

Belongs to the 2Fe2S plant-type ferredoxin family.

Contains 1 2Fe-2S ferredoxin-type domain.

Ontologies

Keywords
   Biological processElectron transport
Transport
   Cellular componentChloroplast
Plastid
   Ligand2Fe-2S
Iron
Iron-sulfur
Metal-binding
   Technical termDirect protein sequencing
Gene Ontology (GO)
   Biological_processelectron transport chain

Inferred from electronic annotation. Source: InterPro

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function2 iron, 2 sulfur cluster binding

Inferred from electronic annotation. Source: UniProtKB-KW

electron carrier activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9696Ferredoxin
PRO_0000189309

Regions

Domain3 – 93912Fe-2S ferredoxin-type

Sites

Metal binding391Iron-sulfur (2Fe-2S) By similarity
Metal binding441Iron-sulfur (2Fe-2S) By similarity
Metal binding471Iron-sulfur (2Fe-2S) By similarity
Metal binding771Iron-sulfur (2Fe-2S) By similarity

Sequences

Sequence LengthMass (Da)Tools
P00227 [UniParc].

Last modified July 21, 1986. Version 1.
Checksum: A4E0FB899C40CD3A

FASTA9610,367
        10         20         30         40         50         60 
ATYKVKFITP EGEQEVECDD DVYVLDAAEE AGIDLPYSCR AGSCSSCAGK VVSGFVDQSD 

        70         80         90 
ESFLDDDQIA EGFVLTCAAY PTSDVTIETH KEEELV 

« Hide

References

[1]"The amino acid sequence of ferredoxin from Brassica napus (rape)."
Takruri I.A.H., Boulter D.
Biochem. J. 185:239-243(1980) [PubMed] [Europe PMC] [Abstract]
Cited for: PROTEIN SEQUENCE.

Cross-references

Sequence databases

PIRFERP. A00234.

3D structure databases

ProteinModelPortalP00227.
SMRP00227. Positions 1-95.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMSSF54292. SSF54292. 1 hit.
TIGRFAMsTIGR02008. fdx_plant. 1 hit.
PROSITEPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFER_BRANA
AccessionPrimary (citable) accession number: P00227
Entry history
Integrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: July 21, 1986
Last modified: February 19, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families