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Protein

Ferredoxin

Gene
N/A
Organism
Clostridium pasteurianum
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactori

[4Fe-4S] clusterNote: Binds 2 [4Fe-4S] clusters.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi9Iron-sulfur 1 (4Fe-4S)1 Publication1
Metal bindingi12Iron-sulfur 1 (4Fe-4S)1
Metal bindingi15Iron-sulfur 1 (4Fe-4S)1
Metal bindingi19Iron-sulfur 2 (4Fe-4S)1
Metal bindingi38Iron-sulfur 2 (4Fe-4S)1
Metal bindingi41Iron-sulfur 2 (4Fe-4S)1
Metal bindingi44Iron-sulfur 2 (4Fe-4S)1
Metal bindingi48Iron-sulfur 1 (4Fe-4S)1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processElectron transport, Transport
Ligand4Fe-4S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin
OrganismiClostridium pasteurianum
Taxonomic identifieri1501 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001591112 – 56FerredoxinAdd BLAST55

Structurei

Secondary structure

156
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni14 – 18Combined sources5
Beta strandi24 – 26Combined sources3
Beta strandi28 – 33Combined sources6
Turni35 – 37Combined sources3
Turni43 – 47Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1CLFNMR-A2-56[»]
ProteinModelPortaliP00195.
SMRiP00195.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP00195.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 284Fe-4S ferredoxin-type 1PROSITE-ProRule annotationAdd BLAST27
Domaini29 – 564Fe-4S ferredoxin-type 2PROSITE-ProRule annotationAdd BLAST28

Keywords - Domaini

Repeat

Family and domain databases

InterProiView protein in InterPro
IPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR000813. 7Fe_ferredoxin.
PfamiView protein in Pfam
PF12838. Fer4_7. 1 hit.
PRINTSiPR00354. 7FE8SFRDOXIN.
PROSITEiView protein in PROSITE
PS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P00195-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYKIADSCV SCGACASECP VNAISQGDSI FVIDADTCID CGNCANVCPV

GAPVQE
Length:56
Mass (Da):5,630
Last modified:January 23, 2007 - v2
Checksum:iD74C5AA8D3E7A4EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M11214 Genomic DNA. Translation: AAA83524.1.
PIRiA94028. FECLCP.
RefSeqiWP_003440320.1. NZ_LFYL01000002.1.

Similar proteinsi

Entry informationi

Entry nameiFER_CLOPA
AccessioniPrimary (citable) accession number: P00195
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 21, 1986
Last sequence update: January 23, 2007
Last modified: May 10, 2017
This is version 99 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references