Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P00082

- CYC2_RHOVT

UniProt

P00082 - CYC2_RHOVT

Protein

Cytochrome c2

Gene

Rvan_1007

Organism
Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 85 (01 Oct 2014)
      Sequence version 2 (08 Feb 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei35 – 351Heme (covalent)
    Binding sitei38 – 381Heme (covalent)
    Metal bindingi39 – 391Iron (heme axial ligand)
    Metal bindingi101 – 1011Iron (heme axial ligand)

    GO - Molecular functioni

    1. electron carrier activity Source: InterPro
    2. heme binding Source: InterPro
    3. iron ion binding Source: InterPro

    GO - Biological processi

    1. oxidation-reduction process Source: UniProtKB-KW
    2. photosynthesis Source: UniProtKB-KW

    Keywords - Biological processi

    Electron transport, Photosynthesis, Transport

    Keywords - Ligandi

    Heme, Iron, Metal-binding

    Enzyme and pathway databases

    BioCyciRVAN648757:GHZT-1020-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Cytochrome c2
    Gene namesi
    Ordered Locus Names:Rvan_1007
    OrganismiRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)
    Taxonomic identifieri648757 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeRhodomicrobium
    ProteomesiUP000001399: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 21211 PublicationAdd
    BLAST
    Chaini22 – 125104Cytochrome c2PRO_0000108348Add
    BLAST

    Post-translational modificationi

    Binds 1 heme group per subunit.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini23 – 123101Cytochrome cPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the cytochrome c family.Curated
    Contains 1 cytochrome c domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Signal

    Phylogenomic databases

    HOGENOMiHOG000009762.
    KOiK08738.

    Family and domain databases

    Gene3Di1.10.760.10. 1 hit.
    InterProiIPR009056. Cyt_c-like_dom.
    IPR002327. Cyt_c_1A/1B.
    IPR003088. Cyt_c_dom.
    [Graphical view]
    PANTHERiPTHR11961. PTHR11961. 1 hit.
    PfamiPF00034. Cytochrom_C. 1 hit.
    [Graphical view]
    PRINTSiPR00604. CYTCHRMECIAB.
    SUPFAMiSSF46626. SSF46626. 1 hit.
    PROSITEiPS51007. CYTC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P00082-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAIKIAMVG AALVWSASAY AAGDPVKGEQ VFKQCKICHQ VGPTAKPGVG    50
    PVQNNVVGSK AGSRPGFNYS DAMKNSGLTW DEATLDKYLE NPKAVVPGTK 100
    MVFVGLKNPQ DRADVIAFLA TQHGQ 125
    Length:125
    Mass (Da):13,187
    Last modified:February 8, 2011 - v2
    Checksum:i9E8949E84DE2423D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti47 – 471P → N AA sequence (PubMed:174109)Curated
    Sequence conflicti52 – 521V → E AA sequence (PubMed:174109)Curated
    Sequence conflicti55 – 595NVVGS → DVFGQ AA sequence (PubMed:174109)Curated
    Sequence conflicti63 – 631S → A AA sequence (PubMed:174109)Curated
    Sequence conflicti118 – 1258FLATQHGQ → YLKQLSGK AA sequence (PubMed:174109)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002292 Genomic DNA. Translation: ADP70281.1.
    PIRiA00074. CCRD2.
    RefSeqiYP_004011380.1. NC_014664.1.

    Genome annotation databases

    EnsemblBacteriaiADP70281; ADP70281; Rvan_1007.
    GeneIDi9931784.
    KEGGirva:Rvan_1007.
    PATRICi42669148. VBIRhoVan113057_1067.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002292 Genomic DNA. Translation: ADP70281.1 .
    PIRi A00074. CCRD2.
    RefSeqi YP_004011380.1. NC_014664.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADP70281 ; ADP70281 ; Rvan_1007 .
    GeneIDi 9931784.
    KEGGi rva:Rvan_1007.
    PATRICi 42669148. VBIRhoVan113057_1067.

    Phylogenomic databases

    HOGENOMi HOG000009762.
    KOi K08738.

    Enzyme and pathway databases

    BioCyci RVAN648757:GHZT-1020-MONOMER.

    Family and domain databases

    Gene3Di 1.10.760.10. 1 hit.
    InterProi IPR009056. Cyt_c-like_dom.
    IPR002327. Cyt_c_1A/1B.
    IPR003088. Cyt_c_dom.
    [Graphical view ]
    PANTHERi PTHR11961. PTHR11961. 1 hit.
    Pfami PF00034. Cytochrom_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00604. CYTCHRMECIAB.
    SUPFAMi SSF46626. SSF46626. 1 hit.
    PROSITEi PS51007. CYTC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299.
    2. "Primary structure determination of two cytochromes c2: close similarity to functionally unrelated mitochondrial cytochrome C."
      Ambler R.P., Meyer T.E., Kamen M.D.
      Proc. Natl. Acad. Sci. U.S.A. 73:472-475(1976) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 22-125.
      Strain: ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299.

    Entry informationi

    Entry nameiCYC2_RHOVT
    AccessioniPrimary (citable) accession number: P00082
    Secondary accession number(s): E3I2Y7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 21, 1986
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 85 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3