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Protein
Submitted name:

Neuron-derived orphan receptor-1 beta

Gene

NOR-1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation, Metal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-SSC-383280. Nuclear Receptor transcription pathway.

Names & Taxonomyi

Protein namesi
Submitted name:
Neuron-derived orphan receptor-1 betaImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:NOR-1Imported
Synonyms:NR4A3Imported
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 1

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiO97727. differential.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000005778.

Structurei

3D structure databases

SMRiO97727. Positions 307-395.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini306 – 38176Nuclear receptor DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.UniRule annotationSAAS annotation
Contains nuclear receptor DNA-binding domain.SAAS annotation

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiKOG4217. Eukaryota.
ENOG410YWNC. LUCA.
GeneTreeiENSGT00840000129681.
HOGENOMiHOG000230925.
HOVERGENiHBG052663.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiIPR003072. NOR1_rcpt.
IPR003070. Nuc_orph_rcpt.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSiPR01286. NORNUCRECPTR.
PR01284. NUCLEARECPTR.
PR00047. STROIDFINGER.
SMARTiSM00399. ZnF_C4. 1 hit.
[Graphical view]
PROSITEiPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O97727-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPCVQAQYSP SPPGSSYAAQ TYGSEYTTEI MNPDYTKLTM DLGSTEITAT
60 70 80 90 100
ATTSLPSFST FMEGYSSNYE LKPSCLYQMQ PSGPRPLIKM EEGRAHGYHH
110 120 130 140 150
HHHDHHHHHH HQQQQQQQQP PPQQQQPSIP PPSGPEDEVL PSTSMYFKQS
160 170 180 190 200
PPSTPTTPVF PQQAGALWED ALPSAQGCIA PGPLLDPPMK AVPTVAGARF
210 220 230 240 250
PLFHFKPSPP HPPAPSPAGG HHLGYDPTAA AALGLPLGAA AAAAAAAAGS
260 270 280 290 300
QAAALEGHPY GLPLAKRAAA LAFSPLGLTT SPTTSSLLGE SPSLPSPPNR
310 320 330 340 350
STASGEGTCA VCGDNAACQH YGVRTCEGCK GFFKRTVQKN AKYVCLANKN
360 370 380 390 400
CPVDKRRRNR CQYCRFQKCL SVGMVKEVVR TDSLKGRRGR LPSKPKSPLQ
410 420 430 440
QEPSQPSPPS PPVCMMNALV RALTDSTPRD LDYSRGHACG IWKFPG
Length:446
Mass (Da):47,716
Last modified:May 1, 1999 - v1
Checksum:iE21960657606FB92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU210903 Genomic DNA. No translation available.
CU302447 Genomic DNA. No translation available.
AJ011768 mRNA. Translation: CAA09764.1.
UniGeneiSsc.761.

Genome annotation databases

EnsembliENSSSCT00000005926; ENSSSCP00000005779; ENSSSCG00000005385.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU210903 Genomic DNA. No translation available.
CU302447 Genomic DNA. No translation available.
AJ011768 mRNA. Translation: CAA09764.1.
UniGeneiSsc.761.

3D structure databases

SMRiO97727. Positions 307-395.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000005778.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000005926; ENSSSCP00000005779; ENSSSCG00000005385.

Phylogenomic databases

eggNOGiKOG4217. Eukaryota.
ENOG410YWNC. LUCA.
GeneTreeiENSGT00840000129681.
HOGENOMiHOG000230925.
HOVERGENiHBG052663.

Enzyme and pathway databases

ReactomeiR-SSC-383280. Nuclear Receptor transcription pathway.

Gene expression databases

ExpressionAtlasiO97727. differential.

Family and domain databases

Gene3Di1.10.565.10. 1 hit.
3.30.50.10. 1 hit.
InterProiIPR003072. NOR1_rcpt.
IPR003070. Nuc_orph_rcpt.
IPR000536. Nucl_hrmn_rcpt_lig-bd.
IPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamiPF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSiPR01286. NORNUCRECPTR.
PR01284. NUCLEARECPTR.
PR00047. STROIDFINGER.
SMARTiSM00399. ZnF_C4. 1 hit.
[Graphical view]
PROSITEiPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "De-differentiated smooth muscle cells in atherosclerotic plaques express NOR-1."
    Cases-Langhoff C., Castello A., Martinez-Gonzalez J., Badimon L.
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Porcine genome sequencing project
    Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DurocImported.
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiO97727_PIG
AccessioniPrimary (citable) accession number: O97727
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: June 8, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.