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Protein
Submitted name:

ATP-dependent RNA helicase DDX42, putative

Gene

PF3D7_0321600

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent RNA helicase DDX42, putativeImported (EC:3.6.4.13Imported)
Gene namesi
ORF Names:PF3D7_0321600Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0321600.

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

IntActiO97290. 1 interactor.
MINTiMINT-1695519.

Structurei

3D structure databases

ProteinModelPortaliO97290.
SMRiO97290.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini285 – 481Helicase ATP-bindingInterPro annotationAdd BLAST197
Domaini506 – 655Helicase C-terminalInterPro annotationAdd BLAST150

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili38 – 58Sequence analysisAdd BLAST21
Coiled coili132 – 152Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000283178.
InParanoidiO97290.
OMAiHRIGRCS.
PhylomeDBiO97290.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Complete.

O97290-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDSDEEKYF EEDGNEEEKI NSDVKNRDSS KEEEIDTLEE FMLEINKFIE
60 70 80 90 100
EEEKKNKEED LESCEYKNLY NNKIINKGNM DAPKFKDNII ISTNKNDSVE
110 120 130 140 150
YKIYDNSLDD NDVTADIYEY LEKQKEICDM EIKKKRKKNT ELESNDKNYM
160 170 180 190 200
EKIYNHNDMK SCDRKEDFKE YDIDDDDNKF LEQQHKYYYH DDDGEEVILD
210 220 230 240 250
DINYNNISLE EFKKDIFVID ENVNSFTLEE SVEYKKKNNI ISMGFNIPKP
260 270 280 290 300
IYSLLQIKNL IDNDILQRIY DSYLSTLFPV QSMVIPIFLS GRDHIVTSNS
310 320 330 340 350
GTGKTLSYII SLIIHMMNYK KIKKNSLCDI DKKENLNFDK NKNDYFSCSA
360 370 380 390 400
DALILTPTKE LCIQIYDDIN NICCNKLKTS VLCSGIDYKK IYNNIRKGTD
410 420 430 440 450
IVICTVKTLI HFVNKKYFSL VKIKYVIVDE FDLLFSKQFV HLVTSVLKNI
460 470 480 490 500
RTDSIKGMFS SMVSEPMYGL VKTYLNKKYI TLKIENKYSM IYEKFYILEE
510 520 530 540 550
CSKYNYLIDN IKKCSDKGQG FIFCNSKKNV MLLYDKLKKE RSFNYISFDF
560 570 580 590 600
IYGDLLQNER IYKYEKLKNK KTNILITTDL MSRGIDLINL NFVINYDCPS
610 620 630 640 650
DIFIYIHRIG RCSSVNSEGQ AITFILPSEK KMAFLIYTHL KNKKRKIDKE
660 670 680 690 700
LEDFILSNNL NNDIQMKSYK RKMNNSILNM PLKNIHNMYN VVGNNMSTEN
710 720 730
SFLQKKNLLV NKENSTKKLN MISADDVLSS SSEDE
Length:735
Mass (Da):86,646
Last modified:October 1, 2000 - v2
Checksum:i5BF7714D1D043723
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA. Translation: CAB39036.2.
RefSeqiXP_001351286.1. XM_001351250.1.

Genome annotation databases

EnsemblProtistsiCAB39036; CAB39036; PF3D7_0321600.
GeneDBiPF3D7_0321600.1:pep.
GeneIDi814530.
KEGGipfa:PFC0955w.

Similar proteinsi

Entry informationi

Entry nameiO97290_PLAF7
AccessioniPrimary (citable) accession number: O97290
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: October 1, 2000
Last modified: December 20, 2017
This is version 121 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported