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Protein
Submitted name:

ATP-dependent RNA helicase DDX6

Gene

PF3D7_0320800

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • ATP-dependent RNA helicase activity Source: GeneDB
  • nucleic acid binding Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionHelicaseUniRule annotationImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent RNA helicase DDX6Imported (EC:3.6.4.13Imported)
Gene namesi
ORF Names:PF3D7_0320800Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0320800.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: GeneDB
  • cytoplasmic stress granule Source: GO_Central
  • nucleolus Source: GO_Central
  • P-body Source: GO_Central

PTM / Processingi

PTM databases

SwissPalmiO97285.

Structurei

3D structure databases

ProteinModelPortaliO97285.
SMRiO97285.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 88Q_MOTIFInterPro annotationAdd BLAST29
Domaini91 – 261Helicase ATP-bindingInterPro annotationAdd BLAST171
Domaini271 – 431Helicase C-terminalInterPro annotationAdd BLAST161

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi60 – 88Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000268797.
InParanoidiO97285.
KOiK12614.
OMAiDWNLMSS.
PhylomeDBiO97285.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

O97285-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYKTNCTNS NANTNTLNSS SNYNKIDDNI ILDEEWKKKI LEPLKDLRYK
60 70 80 90 100
TEDVTKTKGN EFEDYFLKRE LLMGIFEKGY EKPSPIQEES IPVALAGKNI
110 120 130 140 150
LARAKNGTGK TAAFAIPLLE KCNTHKNFIQ GLILVPTREL ALQTSAMIKE
160 170 180 190 200
LGKHMKVQCM VTTGGTSLRE DIMRLYNVVH ILCGTPGRIL DLANKDVANL
210 220 230 240 250
SGCHIMVMDE ADKLLSPEFQ PIVEELMKFL PKEKQILMYS ATFPVTVKEF
260 270 280 290 300
RAIYLSDAHE INLMDELTLK GITQYYAFVK ERQKVHCLNT LFAKLQINQA
310 320 330 340 350
IIFCNSITRV ELLAKKITEL GYSSFYIHAR MSQTHRNRVF HDFRNGACRC
360 370 380 390 400
LVSSDLFTRG IDIQSVNVVI NFDFPKNSET YLHRIGRSGR YGHLGLAINL
410 420 430
ITFEDRFNLY KIEVELGTEI QPIPNEIDPS LYT
Length:433
Mass (Da):49,413
Last modified:May 1, 1999 - v1
Checksum:i0E21B2F447C63A95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844502 Genomic DNA. Translation: CAB39031.1.
RefSeqiXP_001351278.1. XM_001351242.1.

Genome annotation databases

EnsemblProtistsiCAB39031; CAB39031; PF3D7_0320800.
GeneDBiPF3D7_0320800.1:pep.
GeneIDi814522.
KEGGipfa:PFC0915w.

Similar proteinsi

Entry informationi

Entry nameiO97285_PLAF7
AccessioniPrimary (citable) accession number: O97285
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: October 25, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported