O97032 (O97032_DUGJA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DjVLGB EMBL BAA34994.1

Gene names

Name:

DjvlgB EMBL BAA34994.1

Organism

Dugesia japonica (Planarian) EMBL BAA34994.1

Taxonomic identifier

6161 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Platyhelminthes › Turbellaria › Seriata › Tricladida › Paludicola › Dugesiidae › Dugesia

Protein attributes

Sequence length	781 AA.
Sequence status	Fragment.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the DEAD box helicase family. RuleBase RU000492

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 Hydrolase
Technical term	3D-structure PDB 1WRB
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL BAA34994.1

Sequences

	Sequence		Length	Mass (Da)
	O97032 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: AA13FAA92920072D	FASTA	781	88,013
	10 20 30 40 50 60 NNINVITDQM GNLDIKSNDN INQNTQNSNV ASDLNLLTQN KYLENILMMN TYGVNYDHLF 70 80 90 100 110 120 LPQNVAYLAA QQLSNNIMNN RNQINAAYTS QQYPNQSIPI KNIYDQSHLK YQQNSSSWRP 130 140 150 160 170 180 PLNNGNIYDG VKSNPMGLHI LQNGIDLYTN VDSNSVTSAI NFDKYDSIPV SVTGPDYSAT 190 200 210 220 230 240 NVIENFDELK LDPTIRNNIL LASYQRPTPI QKNAIPAILE HRDIMACAQT GSGKTAAFLI 250 260 270 280 290 300 PIINHLVCQD LNQQRYSKTA YPKCLILAPT RELAIQILSE SQKFSLNTPL RSCVVYGGAD 310 320 330 340 350 360 THSQIREVQM GCHLLVATPG RLVDFIEKNK ISLEFCKYIV LDEADRMLDM GFEPQIRKII 370 380 390 400 410 420 EESNMPSGIN RQTLMFSATF PKEIQKLAAD FLYNYIFMTV GRVGSTSDSI KQEIIYMTDV 430 440 450 460 470 480 EKLNYLKNIF NTTAPNTLIL IFVETKKGAD SLARFLLSKG YPVSSIHGDR SQVEREAALS 490 500 510 520 530 540 MFRNGQCPIL VATAVAARGL DIPNVKHVIN YDLPSDIEEY VHRIGRTGRL GNHGRATSFY 550 560 570 580 590 600 VDKNNNIAID LVDLLKEANQ IVPQWLSALA DELKRNSTMG SNNKRHNQRR YKNGNFGGRD 610 620 630 640 650 660 YRQGPSNVNM NSGVNPDYFI SGSVAPRHAK LNNGNYFPRS NELHDQHQKQ NNNNNQVISN 670 680 690 700 710 720 TFHTGISASH LIPGYATFNR QQAPLHFIPH QTNNTQFLSS SGQMALYNRM QNSGHMAPNQ 730 740 750 760 770 780 RFPNEPIHHQ QEQLPITYNF SKNLPYLGQS YSGHNNNNNN NNNTSKINDS DSCYFGNKTP R

References

[1]	"Expression of vasa(vas)-related genes in germline cells and totipotent somatic stem cells of planarians." Shibata N., Umesono Y., Orii H., Sakurai T., Watanabe K., Agata K. Dev. Biol. 206:73-87(1999) [PubMed: 9918696] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: GI EMBL BAA34994.1.
[2]	"Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein." Kurimoto K., Muto Y., Obayashi N., Terada T., Shirouzu M., Yabuki T., Aoki M., Seki E., Matsuda T., Kigawa T., Okumura H., Tanaka A., Shibata N., Kashikawa M., Agata K., Yokoyama S. J. Struct. Biol. 150:58-68(2005) [PubMed: 15797730] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 162-414.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB017003 mRNA. Translation: BAA34994.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1WRB	X-ray	2.40	A/B	162-414	[»]

ProteinModelPortal

O97032.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR014001. DEAD-like_helicase.
IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
IPR001650. Helicase_C.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]

Pfam

PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]

SMART

SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]

PROSITE

PS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

O97032_DUGJA

Accession

Primary (citable) accession number: O97032

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1999
Last sequence update:	May 1, 1999
Last modified:	April 5, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)