Unreviewed, UniProtKB/TrEMBL O96881 (O96881_DROME)

Names and origin

Protein names

Submitted name:
    Transcription factor IIEbeta EMBL AAF47880.1
Submitted name:
    IP01109p EMBL AAY51591.1
    TFIIE small subunit EMBL AAD00188.1

Gene names

Name:	TfIIEbeta FlyBase FBgn0015829
Synonyms:	TfIIE-beta FlyBase FBgn0015829
ORF Names:	CG1276 FlyBase FBgn0015829, Dmel_CG1276 EMBL AAF47880.1

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	292 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	transcription initiation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro
Cellular component	transcription factor TFIIE complex Inferred from electronic annotation. Source: InterPro
Molecular function	RNA polymerase II transcription factor activity Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O96881-1 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: 2E185AACCD4F7BD2	FASTA	292	33,390
	10 20 30 40 50 60 MDPALLRERE AFKKRAMATP TVEKKSKPDR PAPPPPSDDS RRKMRPPNAP RLDATTYKTM 70 80 90 100 110 120 SGSSQYRFGV LAKIVKFMRT RHQDGDDHPL TIDEILDETN QLDIGQSVKN WLASEALHNN 130 140 150 160 170 180 PKVEASPCGT KFSFKPVYKI KDGKTLMRLL KQHDLKGLGG ILLDDVQESL PHCEKVLKNR 190 200 210 220 230 240 SAEILFVVRP IDKKKILFYN DRTANFSVDD EFQKLWRSAT VDAMDDAKID EYLEKQGIRS 250 260 270 280 290 MQDHGLKKAI PKRKKAANKK RQFKKPRDNE HLADVLEVYE DNTLTLKGVN PT

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Drosophila TFIIE: purification, cloning, and functional reconstitution." Wang X., Hansen S.K., Ratts R., Zhou S., Snook A.J., Zehring W. Proc. Natl. Acad. Sci. U.S.A. 94:433-438(1997) [PubMed: 9012800] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U72893 mRNA. Translation: AAD00188.1. AE014296 Genomic DNA. Translation: AAF47880.1. BT022197 mRNA. Translation: AAY51591.1.
RefSeq	NP_523923.1.
UniGene	Dm.2665
3D structure databases
HSSP	HSSP built from PDB template 1D8K based on UniProtKB P29084.
ModBase	Search...
Protein-protein interaction databases
IntAct	O96881. 4 interactions.
Proteomic databases
PRIDE	O96881.
Genome annotation databases
Ensembl	FBgn0015829. Drosophila melanogaster. [Contig view]
GeneID	38527.
KEGG	dme:Dmel_CG1276.
NMPDR	fig|7227.3.peg.8105.
Organism-specific databases
FlyBase	FBgn0015829. TfIIEbeta.
Phylogenomic databases
HOGENOM	O96881.
OMA	O96881. LGDQIIF.
Gene expression databases
ArrayExpress	O96881.
Family and domain databases
InterPro	IPR016656. TFIIE-bsu. IPR017935. TFIIE_bsu-like_DNA-bd. IPR003166. TFIIE_bsu_DNA-bd. IPR011991. Wing_hlx_DNA_bd. [Graphical view]
Gene3D	G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit.
Pfam	PF02186. TFIIE_beta. 1 hit. [Graphical view]
PIRSF	PIRSF016398. TFIIE-beta. 1 hit.
PROSITE	PS51351. TFIIE_BETA_C. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	809104.

Entry information

Entry name

O96881_DROME

Accession

Primary (citable) accession number: O96881

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 1999
Last sequence update:	May 1, 1999
Last modified:	July 7, 2009
This is version 76 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)