Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Intermediate filament protein E2

Gene
N/A
Organism
Branchiostoma lanceolatum (Common lancelet) (Amphioxus lanceolatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Intermediate filament protein E2Imported
OrganismiBranchiostoma lanceolatum (Common lancelet) (Amphioxus lanceolatum)Imported
Taxonomic identifieri7740 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO96754.
SMRiO96754. Positions 130-166.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili186 – 23449Sequence analysisAdd
BLAST
Coiled coili242 – 26928Sequence analysisAdd
BLAST
Coiled coili346 – 41974Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG013015.

Family and domain databases

InterProiIPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view]
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiPF00038. Filament. 1 hit.
[Graphical view]
SMARTiSM01391. Filament. 1 hit.
[Graphical view]
PROSITEiPS00226. IF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O96754-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAILQHKAF SSSSSASFSS SGGGRAGGGG GAFGGGGASF GGGGASFGGG
60 70 80 90 100
GARASFGGGA RSSGSSSFSM GRSGGGFGGG RARGAGGARM MGAGRAGGGG
110 120 130 140 150
GGRSYGGASM TAEQAQQMLV SLGEVRVDRS GDKDELAGLN DRFASFINKV
160 170 180 190 200
RYLEEMNRKL TLQLEMVLKK SGAGAPDIGK MWEAELNNIR KLIEVVNNEK
210 220 230 240 250
NAMNSEKDGL QGEAATLKAS YEEEQTRNEG LRDEITALRP DVDNVSVERV
260 270 280 290 300
DLEARLDTIK AEIDFLKEVY AAELDALRGQ IIDDGPGGVT TIDVGGAPDI
310 320 330 340 350
DFNSILEEVR AQYDALAQQS KMESQGWYDT KVQGLTQQQD QAGRGLDDAR
360 370 380 390 400
AELSKMTSEL RRLQAQIEAA KARNAQLQDQ LTAVEERGVK QLEAKQEEIT
410 420 430 440 450
KLEEELTTIR SKIKEQMVEY QALMAVKMAL DVEIGAYRKL LEGEEGRFGQ
460 470 480 490 500
GLAMGGGGGG GGGGSGGFSS GGGGFSSGGG GFSSGGGGFS SGGGGGFKGT

MQSSAFGRT
Length:509
Mass (Da):52,437
Last modified:May 1, 1999 - v1
Checksum:iEAF9975729601C6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ010293 mRNA. Translation: CAA09067.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ010293 mRNA. Translation: CAA09067.1.

3D structure databases

ProteinModelPortaliO96754.
SMRiO96754. Positions 130-166.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG013015.

Family and domain databases

InterProiIPR001664. IF.
IPR018039. Intermediate_filament_CS.
[Graphical view]
PANTHERiPTHR23239. PTHR23239. 1 hit.
PfamiPF00038. Filament. 1 hit.
[Graphical view]
SMARTiSM01391. Filament. 1 hit.
[Graphical view]
PROSITEiPS00226. IF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO96754_BRALA
AccessioniPrimary (citable) accession number: O96754
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.