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Protein
Submitted name:

ATP-dependent RNA helicase DDX47, putative

Gene

PF3D7_0218400

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • ATP-dependent RNA helicase activity Source: GeneDB
  • nucleic acid binding Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionHelicaseUniRule annotationImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent RNA helicase DDX47, putativeImported
Submitted name:
DEAD/DEAH box helicase, putativeImported
Gene namesi
ORF Names:PF3D7_0218400Imported, PFB0860cImported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0218400.

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

SMRiO96264.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini156 – 184Q_MOTIFInterPro annotationAdd BLAST29
Domaini187 – 358Helicase ATP-bindingInterPro annotationAdd BLAST172
Domaini385 – 529Helicase C-terminalInterPro annotationAdd BLAST145

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili28 – 81Sequence analysisAdd BLAST54

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi156 – 184Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000268802.
InParanoidiO96264.
KOiK14777.
OMAiLNMDFEV.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

O96264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYKNYNTAT ILENFDKKLN KNYKVFNNEE IKKMDEEYEH KIKKKEQLKL
60 70 80 90 100
QKKQIKKQEH KNEKKKKNKN LNKKHNQNNT NNSDNSFHNS DNNINQNGNY
110 120 130 140 150
TNNSDYNIIN NNHDNINFIH GNKNKNHDNS FHNNDDVKNG EVKNLVTNEE
160 170 180 190 200
REKQNVTFED LNICEEILES IKELGWKKPT EIQREILPHA FLKKDIIGLS
210 220 230 240 250
ETGSGKTACF IIPILQDLKV NKQSFYALVI SPTRELCIQI SQNFQALGMN
260 270 280 290 300
LLINICTIYG GVDIVTQSLN LAKKPNVIVS TPGRILDHLN NTKGFNLKNL
310 320 330 340 350
KYLVFDEADK LLSQDFESSI NKLLLILPPN RITFLFSATM TKNVAKLKKA
360 370 380 390 400
CLKNPVKVEV SNKYSTVSTL IETYIFLPLK YKYTYLSSLC FHYQTRNIII
410 420 430 440 450
FTNTCATAQK LNFFCRNLGL KSICLHGKLT QNQRLSSLNS FKVNKYNILI
460 470 480 490 500
STQVGARGLD LQDIKIVINF DICSCKEYIH RVGRTARAGR SGKSITFVTQ
510 520 530 540 550
YDVENFLAIE KQLNKKIDKF TDLDENDVLL YHEQTIEALR LSEIEMKENQ
560
ELYKKNKFKK KK
Length:562
Mass (Da):65,192
Last modified:May 1, 1999 - v1
Checksum:iEE32FF93F42EB6F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001362 Genomic DNA. Translation: AAC71961.1.
LN999943 Genomic DNA. Translation: CZT98198.1.
PIRiC71604.
RefSeqiXP_001349688.1. XM_001349652.1.

Genome annotation databases

EnsemblProtistsiCZT98198; CZT98198; PF3D7_0218400.
GeneDBiPF3D7_0218400.1:pep.
GeneIDi812770.
KEGGipfa:PFB0860c.

Similar proteinsi

Entry informationi

Entry nameiO96264_PLAF7
AccessioniPrimary (citable) accession number: O96264
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: October 25, 2017
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported