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Protein

Secretoglobin family 1D member 1

Gene

SCGB1D1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

May bind androgens and other steroids, may also bind estramustine, a chemotherapeutic agent used for prostate cancer. May be under transcriptional regulation of steroid hormones.

GO - Molecular functioni

  • protein heterodimerization activity Source: UniProtKB

Names & Taxonomyi

Protein namesi
Recommended name:
Secretoglobin family 1D member 1
Alternative name(s):
Lipophilin-A
Gene namesi
Name:SCGB1D1
Synonyms:LIPHA, LPNA
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000168515.3.
HGNCiHGNC:18395. SCGB1D1.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000168515.
PharmGKBiPA34990.

Polymorphism and mutation databases

BioMutaiSCGB1D1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 212 PublicationsAdd BLAST21
ChainiPRO_000003637822 – 90Secretoglobin family 1D member 1Add BLAST69

Proteomic databases

PaxDbiO95968.
PeptideAtlasiO95968.
PRIDEiO95968.

PTM databases

iPTMnetiO95968.
PhosphoSitePlusiO95968.

Expressioni

Tissue specificityi

Expressed in lachrymal gland, thymus, kidney, testis, ovary and salivary gland.

Gene expression databases

BgeeiENSG00000168515.
CleanExiHS_SCGB1D1.
GenevisibleiO95968. HS.

Interactioni

Subunit structurei

Heterodimer of a lipophilin A and a lipophilin C (mammaglobin B) monomer associated head to head.

GO - Molecular functioni

  • protein heterodimerization activity Source: UniProtKB

Protein-protein interaction databases

BioGridi115892. 78 interactors.
IntActiO95968. 3 interactors.
STRINGi9606.ENSP00000303070.

Structurei

3D structure databases

ProteinModelPortaliO95968.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410KIG7. Eukaryota.
ENOG4110Q9J. LUCA.
GeneTreeiENSGT00530000063866.
HOGENOMiHOG000220914.
HOVERGENiHBG006291.
InParanoidiO95968.
OMAiCANGISF.
OrthoDBiEOG091G16OR.
PhylomeDBiO95968.
TreeFamiTF338526.

Family and domain databases

CDDicd00633. Secretoglobin. 1 hit.
Gene3Di1.10.210.10. 1 hit.
InterProiView protein in InterPro
IPR016126. Secretoglobin.
PfamiView protein in Pfam
PF01099. Uteroglobin. 1 hit.
SUPFAMiSSF48201. SSF48201. 1 hit.
PROSITEiView protein in PROSITE
PS51311. SCGB. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O95968-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLSVCLLLL TLALCCYRAN AVVCQALGSE ITGFLLAGKP VFKFQLAKFK
60 70 80 90
APLEAVAAKM EVKKCVDTMA YEKRVLITKT LGKIAEKCDR
Length:90
Mass (Da):9,898
Last modified:May 1, 1999 - v1
Checksum:iDF2D4F7565A87D34
GO

Mass spectrometryi

Molecular mass is 7574.69 Da from positions 22 - 90. Determined by ESI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ224171 mRNA. Translation: CAA11863.1.
BC069170 mRNA. Translation: AAH69170.1.
BC062693 mRNA. Translation: AAH62693.1.
BC069289 mRNA. Translation: AAH69289.1.
CCDSiCCDS8015.1.
RefSeqiNP_006543.1. NM_006552.1.
UniGeneiHs.202686.

Genome annotation databases

EnsembliENST00000306238; ENSP00000303070; ENSG00000168515.
GeneIDi10648.
KEGGihsa:10648.
UCSCiuc001nsz.2. human.

Similar proteinsi

Entry informationi

Entry nameiSG1D1_HUMAN
AccessioniPrimary (citable) accession number: O95968
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 1, 1999
Last modified: September 27, 2017
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families