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Protein

Noelin-2

Gene

OLFM2

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Involved in transforming growth factor beta (TGF-beta)-induced smooth muscle differentiation. TGF-beta induces expression and nuclear translocation of OLFM2 where it binds to SRF, causing its dissociation from the transcriptional repressor HEY2/HERP1 and facilitating binding of SRF to target genes (PubMed:25298399). Plays a role in AMPAR complex organization (By similarity).By similarity1 Publication

GO - Biological processi

  • locomotory behavior Source: Ensembl
  • positive regulation of smooth muscle cell differentiation Source: UniProtKB
  • protein secretion Source: MGI
  • visual perception Source: Ensembl
Complete GO annotation...

Enzyme and pathway databases

BioCyciZFISH:ENSG00000105088-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Noelin-2
Alternative name(s):
Olfactomedin-2
Gene namesi
Name:OLFM2
Synonyms:NOE2
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

HGNCiHGNC:17189. OLFM2.

Subcellular locationi

  • Secreted 1 Publication
  • Cell junctionsynapse By similarity
  • Membrane By similarity
  • Nucleus 1 Publication
  • Cytoplasm 1 Publication

  • Note: Nuclear localization is induced by TGF-beta.1 Publication

GO - Cellular componenti

  • AMPA glutamate receptor complex Source: UniProtKB
  • cell junction Source: UniProtKB-KW
  • cytoplasm Source: UniProtKB
  • extracellular region Source: MGI
  • nucleus Source: UniProtKB
  • synaptic membrane Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Cell junction, Cytoplasm, Membrane, Nucleus, Secreted, Synapse

Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Mutagenesisi144R → Q: No effect on secretion. 1 Publication1
Mutagenesisi420L → S: Completely blocks secretion. Also significantly inhibits secretion of OLFM1 and OLFM3. 1 Publication1

Organism-specific databases

DisGeNETi93145.
OpenTargetsiENSG00000105088.
PharmGKBiPA31916.

Polymorphism and mutation databases

BioMutaiOLFM2.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20Sequence analysisAdd BLAST20
ChainiPRO_000002007821 – 454Noelin-2Add BLAST434

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi74N-linked (GlcNAc...)Sequence analysis1
Glycosylationi155N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi195 ↔ 377PROSITE-ProRule annotation
Glycosylationi275N-linked (GlcNAc...)Sequence analysis1
Glycosylationi310N-linked (GlcNAc...)Sequence analysis1
Glycosylationi399N-linked (GlcNAc...)Sequence analysis1
Glycosylationi441N-linked (GlcNAc...)Sequence analysis1

Post-translational modificationi

N-glycosylated.1 Publication

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

EPDiO95897.
MaxQBiO95897.
PaxDbiO95897.
PeptideAtlasiO95897.
PRIDEiO95897.

PTM databases

iPTMnetiO95897.
PhosphoSitePlusiO95897.

Expressioni

Tissue specificityi

Expressed in aortic smooth muscle (at protein level).1 Publication

Inductioni

By TGF-beta.1 Publication

Gene expression databases

BgeeiENSG00000105088.
CleanExiHS_OLFM2.
ExpressionAtlasiO95897. baseline and differential.
GenevisibleiO95897. HS.

Organism-specific databases

HPAiHPA049961.
HPA057771.

Interactioni

Subunit structurei

Peripherally associated with AMPAR complex. AMPAR complex consists of an inner core made of 4 pore-forming GluA/GRIA proteins (GRIA1, GRIA2, GRIA3 and GRIA4) and 4 major auxiliary subunits arranged in a twofold symmetry. One of the two pairs of distinct binding sites is occupied either by CNIH2, CNIH3 or CACNG2, CACNG3. The other harbors CACNG2, CACNG3, CACNG4, CACNG8 or GSG1L. This inner core of AMPAR complex is complemented by outer core constituents binding directly to the GluA/GRIA proteins at sites distinct from the interaction sites of the inner core constituents. Outer core constituents include at least PRRT1, PRRT2, CKAMP44/SHISA9, FRRS1L and NRN1. The proteins of the inner and outer core serve as a platform for other, more peripherally associated AMPAR constituents, including OLFM2. Alone or in combination, these auxiliary subunits control the gating and pharmacology of the AMPAR complex and profoundly impact their biogenesis and protein processing. Interacts with GRIA2 (By similarity). Interacts with OLFM1 and OLFM3 (PubMed:21228389). Interacts with SRF; the interaction promotes dissociation of SRF from the transcriptional repressor HEY2 (PubMed:25298399).By similarity2 Publications

Protein-protein interaction databases

BioGridi125007. 36 interactors.
IntActiO95897. 12 interactors.
MINTiMINT-1385503.
STRINGi9606.ENSP00000264833.

Structurei

3D structure databases

ProteinModelPortaliO95897.
SMRiO95897.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini194 – 446Olfactomedin-likePROSITE-ProRule annotationAdd BLAST253

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili58 – 85Sequence analysisAdd BLAST28
Coiled coili136 – 193Sequence analysisAdd BLAST58

Sequence similaritiesi

Contains 1 olfactomedin-like domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Signal

Phylogenomic databases

eggNOGiENOG410INP8. Eukaryota.
ENOG410ZRHT. LUCA.
GeneTreeiENSGT00760000119005.
HOGENOMiHOG000232069.
HOVERGENiHBG006513.
InParanoidiO95897.
OMAiFAYYTNT.
OrthoDBiEOG091G05HN.
PhylomeDBiO95897.
TreeFamiTF315964.

Family and domain databases

InterProiIPR031219. Noelin-2.
IPR022082. Noelin_dom.
IPR003112. Olfac-like_dom.
[Graphical view]
PANTHERiPTHR23192:SF27. PTHR23192:SF27. 1 hit.
PfamiPF12308. Noelin-1. 1 hit.
PF02191. OLF. 1 hit.
[Graphical view]
SMARTiSM00284. OLF. 1 hit.
[Graphical view]
PROSITEiPS51132. OLF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O95897-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWPLTVPPPL LLLLCSGLAG QTLFQNPEEG WQLYTSAQAP DGKCICTAVI
60 70 80 90 100
PAQSTCSRDG RSRELRQLME KVQNVSQSME VLELRTYRDL QYVRGMETLM
110 120 130 140 150
RSLDARLRAA DGSLSAKSFQ ELKDRMTELL PLSSVLEQYK ADTRTIVRLR
160 170 180 190 200
EEVRNLSGSL AAIQEEMGAY GYEDLQQRVM ALEARLHACA QKLGCGKLTG
210 220 230 240 250
VSNPITVRAM GSRFGSWMTD TMAPSADSRV WYMDGYYKGR RVLEFRTLGD
260 270 280 290 300
FIKGQNFIQH LLPQPWAGTG HVVYNGSLFY NKYQSNVVVK YHFRSRSVLV
310 320 330 340 350
QRSLPGAGYN NTFPYSWGGF SDMDFMVDES GLWAVYTTNQ NAGNIVVSRL
360 370 380 390 400
DPHTLEVMRS WDTGYPKRSA GEAFMICGVL YVTNSHLAGA KVYFAYFTNT
410 420 430 440 450
SSYEYTDVPF HNQYSHISML DYNPRERALY TWNNGHQVLY NVTLFHVIST

SGDP
Length:454
Mass (Da):51,386
Last modified:June 7, 2005 - v2
Checksum:iEBF4AE8DF909C77F
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_03653286T → M in a colorectal cancer sample; somatic mutation; no effect on secretion. 2 Publications1
Natural variantiVAR_022550106R → Q.1 PublicationCorresponds to variant rs2303100dbSNPEnsembl.1
Natural variantiVAR_050423127T → M.1 PublicationCorresponds to variant rs11556087dbSNPEnsembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF131839 mRNA. Translation: AAD20056.1.
AC008742 Genomic DNA. No translation available.
BC011361 mRNA. Translation: AAH11361.1.
BK001428 Genomic DNA. Translation: DAA01550.1.
CCDSiCCDS12221.1.
RefSeqiNP_001291276.1. NM_001304347.1.
NP_001291277.1. NM_001304348.1.
NP_477512.1. NM_058164.3.
UniGeneiHs.169743.

Genome annotation databases

EnsembliENST00000264833; ENSP00000264833; ENSG00000105088.
GeneIDi93145.
KEGGihsa:93145.
UCSCiuc002mmp.4. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF131839 mRNA. Translation: AAD20056.1.
AC008742 Genomic DNA. No translation available.
BC011361 mRNA. Translation: AAH11361.1.
BK001428 Genomic DNA. Translation: DAA01550.1.
CCDSiCCDS12221.1.
RefSeqiNP_001291276.1. NM_001304347.1.
NP_001291277.1. NM_001304348.1.
NP_477512.1. NM_058164.3.
UniGeneiHs.169743.

3D structure databases

ProteinModelPortaliO95897.
SMRiO95897.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi125007. 36 interactors.
IntActiO95897. 12 interactors.
MINTiMINT-1385503.
STRINGi9606.ENSP00000264833.

PTM databases

iPTMnetiO95897.
PhosphoSitePlusiO95897.

Polymorphism and mutation databases

BioMutaiOLFM2.

Proteomic databases

EPDiO95897.
MaxQBiO95897.
PaxDbiO95897.
PeptideAtlasiO95897.
PRIDEiO95897.

Protocols and materials databases

DNASUi93145.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000264833; ENSP00000264833; ENSG00000105088.
GeneIDi93145.
KEGGihsa:93145.
UCSCiuc002mmp.4. human.

Organism-specific databases

CTDi93145.
DisGeNETi93145.
GeneCardsiOLFM2.
HGNCiHGNC:17189. OLFM2.
HPAiHPA049961.
HPA057771.
neXtProtiNX_O95897.
OpenTargetsiENSG00000105088.
PharmGKBiPA31916.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410INP8. Eukaryota.
ENOG410ZRHT. LUCA.
GeneTreeiENSGT00760000119005.
HOGENOMiHOG000232069.
HOVERGENiHBG006513.
InParanoidiO95897.
OMAiFAYYTNT.
OrthoDBiEOG091G05HN.
PhylomeDBiO95897.
TreeFamiTF315964.

Enzyme and pathway databases

BioCyciZFISH:ENSG00000105088-MONOMER.

Miscellaneous databases

ChiTaRSiOLFM2. human.
GeneWikiiOLFM2.
GenomeRNAii93145.
PROiO95897.

Gene expression databases

BgeeiENSG00000105088.
CleanExiHS_OLFM2.
ExpressionAtlasiO95897. baseline and differential.
GenevisibleiO95897. HS.

Family and domain databases

InterProiIPR031219. Noelin-2.
IPR022082. Noelin_dom.
IPR003112. Olfac-like_dom.
[Graphical view]
PANTHERiPTHR23192:SF27. PTHR23192:SF27. 1 hit.
PfamiPF12308. Noelin-1. 1 hit.
PF02191. OLF. 1 hit.
[Graphical view]
SMARTiSM00284. OLF. 1 hit.
[Graphical view]
PROSITEiPS51132. OLF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiNOE2_HUMAN
AccessioniPrimary (citable) accession number: O95897
Secondary accession number(s): Q6IMJ3, Q96FC2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 21, 2001
Last sequence update: June 7, 2005
Last modified: November 30, 2016
This is version 128 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.