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Protein

Uncharacterized protein C6orf47

Gene

C6orf47

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C6orf47
Alternative name(s):
Protein G4
Gene namesi
Name:C6orf47
Synonyms:G4
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000204439.3
HGNCiHGNC:19076 C6orf47
neXtProtiNX_O95873

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

DisGeNETi57827
OpenTargetsiENSG00000204439
PharmGKBiPA38785

Polymorphism and mutation databases

BioMutaiC6orf47

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000895041 – 294Uncharacterized protein C6orf47Add BLAST294

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei34PhosphoserineBy similarity1
Modified residuei35PhosphoserineBy similarity1
Modified residuei71PhosphoserineCombined sources1
Modified residuei90PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiO95873
MaxQBiO95873
PaxDbiO95873
PeptideAtlasiO95873
PRIDEiO95873
ProteomicsDBi51113

PTM databases

iPTMnetiO95873
PhosphoSitePlusiO95873

Expressioni

Gene expression databases

BgeeiENSG00000204439
CleanExiHS_C6orf47
ExpressionAtlasiO95873 baseline and differential
GenevisibleiO95873 HS

Organism-specific databases

HPAiHPA045281
HPA053373

Interactioni

Protein-protein interaction databases

BioGridi121786, 5 interactors
IntActiO95873, 1 interactor
STRINGi9606.ENSP00000365076

Structurei

3D structure databases

ProteinModelPortaliO95873
SMRiO95873
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IEYM Eukaryota
ENOG411158A LUCA
GeneTreeiENSGT00390000009270
HOVERGENiHBG053330
InParanoidiO95873
OMAiGWLPRPW
OrthoDBiEOG09370LSN
PhylomeDBiO95873
TreeFamiTF339331

Family and domain databases

InterProiView protein in InterPro
IPR029073 DUF4661
PANTHERiPTHR14307 PTHR14307, 1 hit
PfamiView protein in Pfam
PF15576 DUF4661, 1 hit

Sequencei

Sequence statusi: Complete.

O95873-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLRRLGGWL PRPWGRRKPM RPDPPYPEPR RVDSSSENSG SDWDSAPETM
60 70 80 90 100
EDVGHPKTKD SGALRVSGAA SEPSKEEPQV EQLGSKRMDS LKWDQPISST
110 120 130 140 150
QESGRLEAGG ASPKLRWDHV DSGGTRRPGV SPEGGLSVPG PGAPLEKPGR
160 170 180 190 200
REKLLGWLRG EPGAPSRYLG GPEECLQIST NLTLHLLELL ASALLALCSR
210 220 230 240 250
PLRAALDTLG LRGPLGLWLH GLLSFLAALH GLHAVLSLLT AHPLHFACLF
260 270 280 290
GLLQALVLAV SLREPNGDEA ATDWESEGLE REGEEQRGDP GKGL
Length:294
Mass (Da):31,710
Last modified:January 11, 2011 - v2
Checksum:i59ACE578FB60284D
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_02291168G → R5 PublicationsCorresponds to variant dbSNP:rs3130617Ensembl.1
Natural variantiVAR_05679792K → N. Corresponds to variant dbSNP:rs2242655Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF129756 Genomic DNA Translation: AAD18083.1
BA000025 Genomic DNA Translation: BAB63388.1
AL662801 Genomic DNA No translation available.
AL662899 Genomic DNA No translation available.
AL670886 Genomic DNA No translation available.
AL805934 Genomic DNA No translation available.
BX511262 Genomic DNA No translation available.
CR753842 Genomic DNA No translation available.
CR354443 Genomic DNA No translation available.
CR759761 Genomic DNA No translation available.
CH471081 Genomic DNA Translation: EAX03465.1
BC012950 mRNA Translation: AAH12950.1
CCDSiCCDS34399.1
RefSeqiNP_067007.3, NM_021184.3
UniGeneiHs.247323

Genome annotation databases

EnsembliENST00000366431; ENSP00000375392; ENSG00000235360
ENST00000366432; ENSP00000375400; ENSG00000203623
ENST00000375911; ENSP00000365076; ENSG00000204439
ENST00000413113; ENSP00000395128; ENSG00000226103
ENST00000418357; ENSP00000398221; ENSG00000226531
ENST00000431256; ENSP00000406870; ENSG00000228435
ENST00000442972; ENSP00000407188; ENSG00000228177
GeneIDi57827
KEGGihsa:57827
UCSCiuc003nvm.1 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Entry informationi

Entry nameiCF047_HUMAN
AccessioniPrimary (citable) accession number: O95873
Secondary accession number(s): B0UXA1
, B0UZ50, Q5SSS6, Q95IG0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 19, 2005
Last sequence update: January 11, 2011
Last modified: June 20, 2018
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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