O95870 (ABHGA_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 115.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Abhydrolase domain-containing protein 16A EC=3.-.-.- Alternative name(s): HLA-B-associated transcript 5 Protein G5 | ||||||
| Gene names |
| ||||||
| Organism | Homo sapiens (Human) [Reference proteome] | ||||||
| Taxonomic identifier | 9606 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 558 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Subcellular location | Membrane; Multi-pass membrane protein Potential. |
| Sequence similarities | Belongs to the AB hydrolase superfamily. ABHD16 family. |
| Sequence caution | The sequence CAI17808.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence CAI18401.2 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence CAM26084.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. The sequence CAM45793.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing |
| Domain | Transmembrane Transmembrane helix |
| Molecular function | Hydrolase |
| Technical term | Complete proteome Direct protein sequencing Reference proteome |
| Gene Ontology (GO) | |
| Cellular_component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular_function | hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O95870-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O95870-2) The sequence of this isoform differs from the canonical sequence as follows: 1-85: MAKLLSCVLG...PFAFFYLYRK → MPPPALFLSS...SLYSGELAGG |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed Ref.7 | ||||||
| Chain | 2 – 558 | 557 | Abhydrolase domain-containing protein 16A | PRO_0000064833 | |||||
Regions | |||||||||
| Transmembrane | 60 – 80 | 21 | Helical; Potential | ||||||
| Transmembrane | 93 – 113 | 21 | Helical; Potential | ||||||
Sites | |||||||||
| Active site | 355 | 1 | Charge relay system By similarity | ||||||
| Active site | 430 | 1 | Charge relay system By similarity | ||||||
| Active site | 507 | 1 | Charge relay system By similarity | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 85 | 85 | MAKLL…YLYRK → MPPPALFLSSLYPRLEFQND FYRSCIRRSSPQPPPNLAWR PESLYSGELAGG in isoform 2. | VSP_043825 | |||||
Experimental info | |||||||||
| Sequence conflict | 27 | 1 | A → V in AAG22475. Ref.1 | ||||||
Sequences
| ||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Large-scale cDNA transfection screening for genes related to cancer development and progression." Wan D., Gong Y., Qin W., Zhang P., Li J., Wei L., Zhou X., Li H., Qiu X., Zhong F., He L., Yu J., Yao G., Jiang H., Qian L., Yu Y., Shu H., Chen X. Gu J.Proc. Natl. Acad. Sci. U.S.A. 101:15724-15729(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [2] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2). Tissue: Teratocarcinoma. |
| [3] | "Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse." Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., Hood L. Genome Res. 13:2621-2636(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | "Homo sapiens 2,229,817bp genomic DNA of 6p21.3 HLA class I region." Shiina S., Tamiya G., Oka A., Inoko H. Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | "The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. Beck S.Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [7] | "Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides." Gevaert K., Goethals M., Martens L., Van Damme J., Staes A., Thomas G.R., Vandekerckhove J. Nat. Biotechnol. 21:566-569(2003) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 2-12 (ISOFORM 1). Tissue: Platelet. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF193047 mRNA. Translation: AAG22475.1. AK001207 mRNA. Translation: BAA91553.1. AK023194 mRNA. Translation: BAB14455.1. AK297712 mRNA. Translation: BAH12652.1. AF129756 Genomic DNA. Translation: AAD18079.1. BA000025 Genomic DNA. Translation: BAB63383.1. AL662899 Genomic DNA. Translation: CAI18401.2. Different initiation. AL670886 Genomic DNA. Translation: CAI17808.2. Different initiation. AL805934 Genomic DNA. Translation: CAI18530.1. BX248244, BX511262 Genomic DNA. Translation: CAM26084.1. Different initiation. BX511262, BX248244 Genomic DNA. Translation: CAM45793.1. Different initiation. CR354443 Genomic DNA. No translation available. CR753842 Genomic DNA. No translation available. CR759761 Genomic DNA. No translation available. CR759787 Genomic DNA. No translation available. BC031839 mRNA. Translation: AAH31839.1. |
| IPI | IPI00033075. |
| RefSeq | NP_001170986.1. NM_001177515.1. NP_066983.1. NM_021160.2. |
| UniGene | Hs.388188. |
3D structure databases | |
| ProteinModelPortal | O95870. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | O95870. 15 interactions. |
| MINT | MINT-1032766. |
Protein family/group databases | |
| MEROPS | S09.065. |
PTM databases | |
| PhosphoSite | O95870. |
Proteomic databases | |
| PaxDb | O95870. |
| PRIDE | O95870. |
Protocols and materials databases | |
| DNASU | 7920. |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000395952; ENSP00000379282; ENSG00000204427. ENST00000440843; ENSP00000410347; ENSG00000204427. ENST00000446529; ENSP00000395665; ENSG00000206403. ENST00000546528; ENSP00000446494; ENSG00000224552. ENST00000547161; ENSP00000448497; ENSG00000235676. ENST00000547325; ENSP00000447271; ENSG00000236063. ENST00000548592; ENSP00000448431; ENSG00000206403. ENST00000549543; ENSP00000449006; ENSG00000231488. ENST00000549722; ENSP00000447549; ENSG00000230475. ENST00000549853; ENSP00000447846; ENSG00000236063. ENST00000550556; ENSP00000447498; ENSG00000235676. ENST00000550719; ENSP00000449881; ENSG00000230475. ENST00000551038; ENSP00000449579; ENSG00000231488. ENST00000552042; ENSP00000448451; ENSG00000224552. |
| GeneID | 7920. |
| KEGG | hsa:7920. |
| UCSC | uc003nvx.2. human. |
Organism-specific databases | |
| CTD | 7920. |
| GeneCards | GC06M031657. |
| H-InvDB | HIX0016012. HIX0040568. |
| HGNC | HGNC:13921. ABHD16A. |
| MIM | 142620. gene. |
| neXtProt | NX_O95870. |
| PharmGKB | PA25266. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | COG1073. |
| HOVERGEN | HBG050666. |
| InParanoid | O95870. |
| OMA | KRQLANY. |
| OrthoDB | EOG49078Z. |
| PhylomeDB | O95870. |
Gene expression databases | |
| ArrayExpress | O95870. |
| Bgee | O95870. |
| CleanEx | HS_BAT5. |
| Genevestigator | O95870. |
| GermOnline | ENSG00000204427. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR026604. ABHD16. [Graphical view] |
| PANTHER | PTHR12277:SF3. PTHR12277:SF3. 1 hit. |
| ProtoNet | Search... |
Other | |
| BindingDB | O95870. |
| ChEMBL | CHEMBL6168. |
| ChiTaRS | ABHD16A. human. |
| GenomeRNAi | 7920. |
| NextBio | 30411. |
| SOURCE | Search... |
Entry information
| Entry name | ABHGA_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O95870 Secondary accession number(s): A2BEY3 Q9NW33 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 6 Human chromosome 6: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
