O95696 (BRD1_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 90.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Bromodomain-containing protein 1 Alternative name(s): BR140-like protein Bromodomain and PHD finger-containing protein 2 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 1058 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Ref.7 |
| Subunit structure | Component of the MOZ/MORF complex composed at least of ING5, KAT6A, KAT6B, MEAF6 and one of BRPF1, BRD1/BRPF2 and BRPF3. |
| Subcellular location | |
| Tissue specificity | Highly expressed in testis. |
| Sequence similarities | Contains 1 bromo domain. Contains 1 PHD-type zinc finger. Contains 1 PWWP domain. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | Bromodomain Zinc-finger |
| Ligand | Metal-binding Zinc |
| Molecular function | Chromatin regulator |
| PTM | Acetylation Phosphoprotein |
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | histone H3 acetylation Inferred from direct assay Ref.7. Source: UniProtKB |
| Cellular component | MOZ/MORF histone acetyltransferase complex Inferred from direct assay Ref.7. Source: UniProtKB |
| Molecular function | zinc ion binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O95696-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O95696-2) The sequence of this isoform differs from the canonical sequence as follows: 786-786: E → EGDKSPPKLE...QLGTKTFLSV |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1058 | 1058 | Bromodomain-containing protein 1 | PRO_0000211177 | |||||||||||||||||||||||
Regions | |||||||||||||||||||||||||||
| Domain | 579 – 649 | 71 | Bromo | ||||||||||||||||||||||||
| Domain | 929 – 1012 | 84 | PWWP | ||||||||||||||||||||||||
| Zinc finger | 214 – 264 | 51 | PHD-type | ||||||||||||||||||||||||
Amino acid modifications | |||||||||||||||||||||||||||
| Modified residue | 25 | 1 | Phosphoserine Ref.6 | ||||||||||||||||||||||||
| Modified residue | 128 | 1 | Phosphoserine Ref.8 Ref.11 Ref.12 | ||||||||||||||||||||||||
| Modified residue | 368 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 418 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 516 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 519 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 523 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 903 | 1 | N6-acetyllysine Ref.13 | ||||||||||||||||||||||||
| Modified residue | 1051 | 1 | Phosphothreonine Ref.11 | ||||||||||||||||||||||||
| Modified residue | 1052 | 1 | Phosphoserine Ref.10 | ||||||||||||||||||||||||
| Modified residue | 1055 | 1 | Phosphoserine Ref.10 Ref.11 Ref.12 | ||||||||||||||||||||||||
Natural variations | |||||||||||||||||||||||||||
| Alternative sequence | 786 | 1 | E → EGDKSPPKLEPSDALPLPSN SETNSEPPTLKPVELNPEQS KLFKRVTFDNESHSACTQSA LVSGRPPEPTRASSGDVPAA AASAVAEPASDVNRRTSVLF CKSKSVSPPKSAKNTETQPT SPQLGTKTFLSV in isoform 2. | VSP_040262 | |||||||||||||||||||||||
| Natural variant | 38 | 1 | R → G. Corresponds to variant rs11549978 [ dbSNP | Ensembl ]. | VAR_048424 | |||||||||||||||||||||||
| Natural variant | 321 | 1 | A → S. Corresponds to variant rs12157714 [ dbSNP | Ensembl ]. | VAR_048425 | |||||||||||||||||||||||
| Natural variant | 730 | 1 | A → T. Corresponds to variant rs35331092 [ dbSNP | Ensembl ]. | VAR_048426 | |||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||
| Beta strand | 932 – 935 | 4 | |||||||||||||||||||||||||
| Beta strand | 943 – 947 | 5 | |||||||||||||||||||||||||
| Helix | 969 – 973 | 5 | |||||||||||||||||||||||||
| Helix | 977 – 980 | 4 | |||||||||||||||||||||||||
| Beta strand | 986 – 991 | 6 | |||||||||||||||||||||||||
| Beta strand | 998 – 1002 | 5 | |||||||||||||||||||||||||
| Helix | 1003 – 1005 | 3 | |||||||||||||||||||||||||
| Beta strand | 1006 – 1008 | 3 | |||||||||||||||||||||||||
| Helix | 1013 – 1020 | 8 | |||||||||||||||||||||||||
| Helix | 1026 – 1045 | 20 | |||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The cloning, mapping and expression of a novel gene, BRL, related to the AF10 leukaemia gene." McCullagh P., Chaplin T., Meerabux J., Grenzelias D., Lillington D., Poulsom R., Gregorini A., Saha V., Young B.D. Oncogene 18:7442-7452(1999) [PubMed: 10602503] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORM 1). |
| [2] | "A genome annotation-driven approach to cloning the human ORFeome." Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A., Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J., Beare D.M., Dunham I. Genome Biol. 5:R84.1-R84.11(2004) [PubMed: 15461802] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [3] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). |
| [4] | "The DNA sequence of human chromosome 22." Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. Wright H.Nature 402:489-495(1999) [PubMed: 10591208] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [5] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed: 17081983] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-25, MASS SPECTROMETRY. Tissue: Epithelium. |
| [7] | "ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation." Doyon Y., Cayrou C., Ullah M., Landry A.-J., Cote V., Selleck W., Lane W.S., Tan S., Yang X.-J., Cote J. Mol. Cell 21:51-64(2006) [PubMed: 16387653] [Abstract] Cited for: FUNCTION, IDENTIFICATION IN THE MOZ/MORF COMPLEX. |
| [8] | "Evaluation of the low-specificity protease elastase for large-scale phosphoproteome analysis." Wang B., Malik R., Nigg E.A., Korner R. Anal. Chem. 80:9526-9533(2008) [PubMed: 19007248] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-128, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Molecular architecture of quartet MOZ/MORF histone acetyltransferase complexes." Ullah M., Pelletier N., Xiao L., Zhao S.P., Wang K., Degerny C., Tahmasebi S., Cayrou C., Doyon Y., Goh S.-L., Champagne N., Cote J., Yang X.-J. Mol. Cell. Biol. 28:6828-6843(2008) [PubMed: 18794358] [Abstract] Cited for: IDENTIFICATION IN THE MOZ/MORF COMPLEX. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed: 18669648] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1052 AND SER-1055, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach." Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S. Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-128; THR-1051 AND SER-1055, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [12] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed: 19690332] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-128 AND SER-1055, MASS SPECTROMETRY. Tissue: Leukemic T-cell. |
| [13] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-368; LYS-418; LYS-516; LYS-519; LYS-523 AND LYS-903, MASS SPECTROMETRY. |
| [14] | "Crystal structure of PWWP domain of human bromodomain-containing protein 1." Structural genomics consortium (SGC) Submitted (MAR-2010) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF 925-1049. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF005067 mRNA. Translation: AAF34320.1. CR456408 mRNA. Translation: CAG30294.1. AK292428 mRNA. Translation: BAF85117.1. Z98885 Genomic DNA. Translation: CAB11574.1. Z98885 Genomic DNA. Translation: CAO72061.1. CH471138 Genomic DNA. Translation: EAW73473.1. | ||||||||||||||||||||||||||||||
| IPI | IPI00032214. IPI00384471. | ||||||||||||||||||||||||||||||
| RefSeq | NP_055392.1. NM_014577.1. | ||||||||||||||||||||||||||||||
| UniGene | Hs.127950. | ||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | O95696. | ||||||||||||||||||||||||||||||
| SMR | O95696. Positions 208-269, 563-680, 928-1047. | ||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||
| IntAct | O95696. 2 interactions. | ||||||||||||||||||||||||||||||
| MINT | MINT-1186761. | ||||||||||||||||||||||||||||||
| STRING | O95696. | ||||||||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||||||||
| PhosphoSite | O95696. | ||||||||||||||||||||||||||||||
2D gel databases | |||||||||||||||||||||||||||||||
| OGP | O95696. | ||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||
| PRIDE | O95696. | ||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||
| Ensembl | ENST00000216267; ENSP00000216267; ENSG00000100425. ENST00000342989; ENSP00000345886; ENSG00000100425. ENST00000358974; ENSP00000351861; ENSG00000100425. ENST00000404034; ENSP00000384076; ENSG00000100425. ENST00000404760; ENSP00000385858; ENSG00000100425. ENST00000438393; ENSP00000388027; ENSG00000100425. ENST00000457780; ENSP00000410042; ENSG00000100425. | ||||||||||||||||||||||||||||||
| GeneID | 23774. | ||||||||||||||||||||||||||||||
| KEGG | hsa:23774. | ||||||||||||||||||||||||||||||
| UCSC | uc003biv.1. human. | ||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||
| CTD | 23774. | ||||||||||||||||||||||||||||||
| GeneCards | GC22M050166. | ||||||||||||||||||||||||||||||
| H-InvDB | HIX0016601. | ||||||||||||||||||||||||||||||
| HGNC | HGNC:1102. BRD1. | ||||||||||||||||||||||||||||||
| HPA | HPA000807. HPA001063. | ||||||||||||||||||||||||||||||
| MIM | 604589. gene. | ||||||||||||||||||||||||||||||
| neXtProt | NX_O95696. | ||||||||||||||||||||||||||||||
| PharmGKB | PA25413. | ||||||||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||
| eggNOG | prNOG15885. | ||||||||||||||||||||||||||||||
| HOVERGEN | HBG004895. | ||||||||||||||||||||||||||||||
| OMA | TCAMKSS. | ||||||||||||||||||||||||||||||
| OrthoDB | EOG44QT08. | ||||||||||||||||||||||||||||||
| PhylomeDB | O95696. | ||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||
| ArrayExpress | O95696. | ||||||||||||||||||||||||||||||
| Bgee | O95696. | ||||||||||||||||||||||||||||||
| CleanEx | HS_BRD1. | ||||||||||||||||||||||||||||||
| Genevestigator | O95696. | ||||||||||||||||||||||||||||||
| GermOnline | ENSG00000100425. Homo sapiens. | ||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||
| InterPro | IPR001487. Bromodomain. IPR018359. Bromodomain_CS. IPR019542. Enhancer_polycomb-like_N. IPR000313. PWWP. IPR019786. Zinc_finger_PHD-type_CS. IPR011011. Znf_FYVE_PHD. IPR001965. Znf_PHD. IPR019787. Znf_PHD-finger. IPR013083. Znf_RING/FYVE/PHD. [Graphical view] | ||||||||||||||||||||||||||||||
| Gene3D | G3DSA:1.20.920.10. Bromodomain. 1 hit. G3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit. | ||||||||||||||||||||||||||||||
| KO | K11349. | ||||||||||||||||||||||||||||||
| Pfam | PF00439. Bromodomain. 1 hit. PF10513. EPL1. 1 hit. PF00855. PWWP. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||
| PRINTS | PR00503. BROMODOMAIN. | ||||||||||||||||||||||||||||||
| SMART | SM00297. BROMO. 1 hit. SM00249. PHD. 2 hits. SM00293. PWWP. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||
| SUPFAM | SSF47370. Bromodomain. 1 hit. SSF57903. FYVE_PHD_ZnF. 1 hit. | ||||||||||||||||||||||||||||||
| PROSITE | PS00633. BROMODOMAIN_1. 1 hit. PS50014. BROMODOMAIN_2. 1 hit. PS50812. PWWP. 1 hit. PS01359. ZF_PHD_1. 1 hit. PS50016. ZF_PHD_2. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||
| NextBio | 46753. | ||||||||||||||||||||||||||||||
| PMAP-CutDB | O95696. | ||||||||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||||||||
Entry information
| Entry name | BRD1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O95696 Secondary accession number(s): A6ZJA4 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 22 Human chromosome 22: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with