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Protein
Submitted name:

PTBP2

Gene

PTBP2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
PTBP2Imported
Gene namesi
Name:PTBP2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiO95652.

Expressioni

Gene expression databases

BgeeiO95652.

Interactioni

Protein-protein interaction databases

MINTiMINT-2875461.
STRINGi9606.ENSP00000412788.

Structurei

3D structure databases

ProteinModelPortaliO95652.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 9353RRM (RNA recognition motif)InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1190. Eukaryota.
ENOG410XPMZ. LUCA.
HOGENOMiHOG000231699.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

O95652-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LPVAAVPGAL SPLAIPNAAA AAAAAAAGRV GMPGVSAGGN TVLLVSNLNE
60 70 80 90
EMVTPQSLFT LFGVYGDVQR VKILYNKKDS ALIQMADGNQ SQL
Length:93
Mass (Da):9,364
Last modified:May 1, 1999 - v1
Checksum:iB2DA59E594366FFB
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei93 – 931Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89241 Genomic DNA. Translation: AAD09652.1.
UniGeneiHs.596061.
Hs.743449.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U89241 Genomic DNA. Translation: AAD09652.1.
UniGeneiHs.596061.
Hs.743449.

3D structure databases

ProteinModelPortaliO95652.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-2875461.
STRINGi9606.ENSP00000412788.

Proteomic databases

PaxDbiO95652.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG1190. Eukaryota.
ENOG410XPMZ. LUCA.
HOGENOMiHOG000231699.

Miscellaneous databases

ChiTaRSiPTBP2. human.

Gene expression databases

BgeeiO95652.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiPS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Evolutionary conservation of a 2 kilobase intronic sequence flanking a tissue-specific alternative exon in the nPTB gene."
    Rahman L., Bliskovsky V., Kaye F.J., Zajac-Kaye M.
    Genomics 0:0-0(2003)
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO95652_HUMAN
AccessioniPrimary (citable) accession number: O95652
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.