O95425 (SVIL_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 114.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Supervillin Alternative name(s): Archvillin p205/p250 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 2214 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Forms a high-affinity link between the actin cytoskeleton and the membrane. Isoform 1 (archvillin) is among the first costameric proteins to assemble during myogenesis and it contributes to myogenic membrane structure and differentiation. Appears to be involved in myosin II assembly. May modulate myosin II regulation through MLCK during cell spreading, an initial step in cell migration. May play a role in invadopodial function. Isoform 2 may be involved in modulation of focal adhesions. Supervillin-mediated down-regulation of focal adehesions involves binding to TRIP6 By similarity. Ref.11 |
| Subunit structure | Associates with F-actin. Interacts with NEB. Interacts with MYH9. Interacts with MYLK. Isoform 2 interacts with TRIP6. Isoform 2 interacts with DYNLT1 By similarity. Ref.1 Ref.7 |
| Subcellular location | Cell membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm › cytoskeleton. Cell projection › invadopodium. Cell projection › podosome. Note: Tightly associated with both actin filaments and plasma membranes. Ref.1 Ref.11 |
| Tissue specificity | Expressed in many tissues. Most abundant in muscle, bone marrow, thyroid gland and salivary gland. Isoform 1 (archvillin) is muscle specific. Ref.1 |
| Sequence similarities | Belongs to the villin/gelsolin family. Contains 5 gelsolin-like repeats. Contains 1 HP (headpiece) domain. |
Ontologies
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: O95425-1) Also known as: Archvillin; p250; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: O95425-2) Also known as: Supervillin; p205; The sequence of this isoform differs from the canonical sequence as follows: 276-669: Missing. 750-781: Missing. | ||||||
| Note: Contains a phosphoserine at position 270. Contains a phosphoserine at position 261. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||
Molecule processing | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2214 | 2214 | Supervillin | PRO_0000218740 | ||||||||||||||||||
Regions | ||||||||||||||||||||||
| Repeat | 1441 – 1540 | 100 | Gelsolin-like 1 | |||||||||||||||||||
| Repeat | 1560 – 1682 | 123 | Gelsolin-like 2 | |||||||||||||||||||
| Repeat | 1752 – 1862 | 111 | Gelsolin-like 3 | |||||||||||||||||||
| Repeat | 1881 – 1982 | 102 | Gelsolin-like 4 | |||||||||||||||||||
| Repeat | 2015 – 2122 | 108 | Gelsolin-like 5 | |||||||||||||||||||
| Domain | 2151 – 2214 | 64 | HP | |||||||||||||||||||
| Region | 1 – 174 | 174 | Interaction with MYLK By similarity | |||||||||||||||||||
| Region | 1419 – 1687 | 269 | Interaction with NEB | |||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||
| Modified residue | 50 | 1 | Phosphoserine Ref.10 Ref.13 | |||||||||||||||||||
| Modified residue | 221 | 1 | Phosphoserine Ref.5 Ref.10 Ref.13 | |||||||||||||||||||
| Modified residue | 245 | 1 | Phosphoserine Ref.5 Ref.10 Ref.13 Ref.14 | |||||||||||||||||||
| Modified residue | 270 | 1 | Phosphoserine Ref.5 Ref.8 Ref.9 Ref.10 Ref.13 Ref.14 | |||||||||||||||||||
| Modified residue | 673 | 1 | Phosphoserine By similarity | |||||||||||||||||||
| Modified residue | 675 | 1 | Phosphoserine By similarity | |||||||||||||||||||
| Modified residue | 707 | 1 | Phosphoserine Ref.13 Ref.14 | |||||||||||||||||||
| Modified residue | 852 | 1 | Phosphothreonine Ref.6 | |||||||||||||||||||
| Modified residue | 914 | 1 | Phosphoserine Ref.13 Ref.14 | |||||||||||||||||||
| Modified residue | 920 | 1 | Phosphoserine Ref.10 Ref.13 | |||||||||||||||||||
| Modified residue | 924 | 1 | Phosphoserine Ref.13 | |||||||||||||||||||
| Modified residue | 968 | 1 | Phosphoserine Ref.13 Ref.14 | |||||||||||||||||||
| Modified residue | 1000 | 1 | Phosphoserine By similarity | |||||||||||||||||||
| Modified residue | 1052 | 1 | Phosphoserine By similarity | |||||||||||||||||||
| Modified residue | 1111 | 1 | Phosphothreonine Ref.10 | |||||||||||||||||||
| Modified residue | 1120 | 1 | Phosphoserine Ref.10 Ref.13 | |||||||||||||||||||
| Modified residue | 1225 | 1 | Phosphoserine Ref.10 Ref.13 | |||||||||||||||||||
| Modified residue | 1230 | 1 | Phosphothreonine Ref.13 | |||||||||||||||||||
| Modified residue | 1322 | 1 | Phosphoserine Ref.10 Ref.13 | |||||||||||||||||||
Natural variations | ||||||||||||||||||||||
| Alternative sequence | 276 – 669 | 394 | Missing in isoform 2. | VSP_012425 | ||||||||||||||||||
| Alternative sequence | 750 – 781 | 32 | Missing in isoform 2. | VSP_012426 | ||||||||||||||||||
| Natural variant | 189 | 1 | V → A. Ref.1 Ref.2 Corresponds to variant rs10160013 [ dbSNP | Ensembl ]. | VAR_020791 | ||||||||||||||||||
| Natural variant | 422 | 1 | V → I. Ref.2 Ref.4 Corresponds to variant rs1247696 [ dbSNP | Ensembl ]. | VAR_058308 | ||||||||||||||||||
| Natural variant | 1041 | 1 | V → L. Corresponds to variant rs7070135 [ dbSNP | Ensembl ]. | VAR_057467 | ||||||||||||||||||
| Natural variant | 1235 | 1 | P → A. Ref.1 Ref.2 Ref.10 Ref.13 Ref.14 Corresponds to variant rs2368406 [ dbSNP | Ensembl ]. | VAR_020792 | ||||||||||||||||||
| Natural variant | 1688 | 1 | S → P. Corresponds to variant rs11007612 [ dbSNP | Ensembl ]. | VAR_024691 | ||||||||||||||||||
| Natural variant | 2005 | 1 | I → V. Corresponds to variant rs7921306 [ dbSNP | Ensembl ]. | VAR_057468 | ||||||||||||||||||
| Natural variant | 2041 | 1 | A → V. Corresponds to variant rs17694739 [ dbSNP | Ensembl ]. | VAR_057469 | ||||||||||||||||||
Secondary structure | ||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||
| Helix | 2159 – 2162 | 4 | ||||||||||||||||||||
| Beta strand | 2169 – 2172 | 4 | ||||||||||||||||||||
| Helix | 2177 – 2179 | 3 | ||||||||||||||||||||
| Helix | 2182 – 2188 | 7 | ||||||||||||||||||||
| Beta strand | 2189 – 2191 | 3 | ||||||||||||||||||||
| Helix | 2193 – 2196 | 4 | ||||||||||||||||||||
| Helix | 2201 – 2211 | 11 | ||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Cloning, characterization, and chromosomal localization of human supervillin (SVIL)." Pope R.K., Pestonjamasp K.N., Smith K.P., Wulfkuhle J.D., Strassel C.P., Lawrence J.B., Luna E.J. Genomics 52:342-351(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), VARIANTS ALA-189 AND ALA-1235, INTERACTION WITH ACTIN, SUBCELLULAR LOCATION, TISSUE SPECIFICITY. Tissue: Cervix carcinoma and Kidney. |
| [2] | "Archvillin, a muscle-specific isoform of supervillin, is an early expressed component of the costameric membrane skeleton." Oh S.W., Pope R.K., Smith K.P., Crowley J.L., Nebl T., Lawrence J.B., Luna E.J. J. Cell Sci. 116:2261-2275(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANTS ALA-189; ILE-422 AND ALA-1235. |
| [3] | "The DNA sequence and comparative analysis of human chromosome 10." Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L., Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K., Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L., Taylor A., Battles J. Rogers J.Nature 429:375-381(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [4] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT ILE-422. |
| [5] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-221 AND SER-245, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-270 (ISOFORM 2), MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [6] | "ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage." Matsuoka S., Ballif B.A., Smogorzewska A., McDonald E.R. III, Hurov K.E., Luo J., Bakalarski C.E., Zhao Z., Solimini N., Lerenthal Y., Shiloh Y., Gygi S.P., Elledge S.J. Science 316:1160-1166(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-852, MASS SPECTROMETRY. Tissue: Embryonic kidney. |
| [7] | "Archvillin anchors in the Z-line of skeletal muscle via the nebulin C-terminus." Lee M.-A., Joo Y.M., Lee Y.M., Kim H.S., Kim J.-H., Choi J.-K., Ahn S.-J., Min B.-I., Kim C.-R. Biochem. Biophys. Res. Commun. 374:320-324(2008) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH NEB. |
| [8] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-270 (ISOFORM 2), MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [9] | "Phosphoproteome of resting human platelets." Zahedi R.P., Lewandrowski U., Wiesner J., Wortelkamp S., Moebius J., Schuetz C., Walter U., Gambaryan S., Sickmann A. J. Proteome Res. 7:526-534(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-270, MASS SPECTROMETRY. Tissue: Platelet. |
| [10] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50; SER-221; SER-245; SER-920; THR-1111; SER-1120; SER-1225 AND SER-1322, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-261 AND SER-270 (ISOFORM 2), VARIANT [LARGE SCALE ANALYSIS] ALA-1235, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [11] | "Supervillin reorganizes the actin cytoskeleton and increases invadopodial efficiency." Crowley J.L., Smith T.C., Fang Z., Takizawa N., Luna E.J. Mol. Biol. Cell 20:948-962(2009) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION. |
| [12] | "Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions." Mayya V., Lundgren D.H., Hwang S.-I., Rezaul K., Wu L., Eng J.K., Rodionov V., Han D.K. Sci. Signal. 2:RA46-RA46(2009) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Leukemic T-cell. |
| [13] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-50; SER-221; SER-245; SER-270; SER-707; SER-914; SER-920; SER-924; SER-968; SER-1120; SER-1225; THR-1230 AND SER-1322, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-261 (ISOFORM 2), VARIANT [LARGE SCALE ANALYSIS] ALA-1235, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [14] | "System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-245; SER-707; SER-914 AND SER-968, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-261 AND SER-270 (ISOFORM 2), VARIANT [LARGE SCALE ANALYSIS] ALA-1235, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF051850 mRNA. Translation: AAC64695.1. AF051851 mRNA. Translation: AAC64696.1. AF109135 mRNA. Translation: AAD14682.1. AL160060, AL158167 Genomic DNA. Translation: CAH71300.1. AL160060, AL158167 Genomic DNA. Translation: CAH71301.1. AL158167, AL160060 Genomic DNA. Translation: CAI15237.1. AL158167, AL160060 Genomic DNA. Translation: CAI15236.1. CH471072 Genomic DNA. Translation: EAW86018.1. CH471072 Genomic DNA. Translation: EAW86019.1. | ||||||||||||||||||
| IPI | IPI00018370. IPI00412650. | ||||||||||||||||||
| RefSeq | NP_003165.2. NM_003174.3. NP_068506.2. NM_021738.2. | ||||||||||||||||||
| UniGene | Hs.499209. | ||||||||||||||||||
3D structure databases | |||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | O95425. | ||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||
| IntAct | O95425. 6 interactions. | ||||||||||||||||||
| MINT | MINT-1369291. | ||||||||||||||||||
| STRING | 9606.ENSP00000348128. | ||||||||||||||||||
PTM databases | |||||||||||||||||||
| PhosphoSite | O95425. | ||||||||||||||||||
Proteomic databases | |||||||||||||||||||
| PaxDb | O95425. | ||||||||||||||||||
| PRIDE | O95425. | ||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||
| DNASU | 6840. | ||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||
Genome annotation databases | |||||||||||||||||||
| Ensembl | ENST00000355867; ENSP00000348128; ENSG00000197321. ENST00000375398; ENSP00000364547; ENSG00000197321. ENST00000375400; ENSP00000364549; ENSG00000197321. | ||||||||||||||||||
| GeneID | 6840. | ||||||||||||||||||
| KEGG | hsa:6840. | ||||||||||||||||||
| UCSC | uc001iut.1. human. uc001iuu.1. human. | ||||||||||||||||||
Organism-specific databases | |||||||||||||||||||
| CTD | 6840. | ||||||||||||||||||
| GeneCards | GC10M029786. | ||||||||||||||||||
| H-InvDB | HIX0008738. | ||||||||||||||||||
| HGNC | HGNC:11480. SVIL. | ||||||||||||||||||
| HPA | CAB010878. HPA020095. HPA020138. | ||||||||||||||||||
| MIM | 604126. gene. | ||||||||||||||||||
| neXtProt | NX_O95425. | ||||||||||||||||||
| PharmGKB | PA36265. | ||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||
| eggNOG | NOG324767. | ||||||||||||||||||
| HOVERGEN | HBG052980. | ||||||||||||||||||
| InParanoid | O95425. | ||||||||||||||||||
| KO | K10369. | ||||||||||||||||||
| OMA | VNLTEQN. | ||||||||||||||||||
| PhylomeDB | O95425. | ||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||
| Pathway_Interaction_DB | ar_pathway. Coregulation of Androgen receptor activity. | ||||||||||||||||||
Gene expression databases | |||||||||||||||||||
| ArrayExpress | O95425. | ||||||||||||||||||
| Bgee | O95425. | ||||||||||||||||||
| CleanEx | HS_SVIL. | ||||||||||||||||||
| Genevestigator | O95425. | ||||||||||||||||||
| GermOnline | ENSG00000197321. Homo sapiens. | ||||||||||||||||||
Family and domain databases | |||||||||||||||||||
| Gene3D | 1.10.950.10. 1 hit. | ||||||||||||||||||
| InterPro | IPR007123. Gelsolin_dom. IPR015628. Supervillin. IPR007122. Villin/Gelsolin. IPR003128. Villin_headpiece. [Graphical view] | ||||||||||||||||||
| PANTHER | PTHR11977. PTHR11977. 1 hit. PTHR11977:SF4. PTHR11977:SF4. 1 hit. | ||||||||||||||||||
| Pfam | PF00626. Gelsolin. 1 hit. PF02209. VHP. 1 hit. [Graphical view] | ||||||||||||||||||
| PRINTS | PR00597. GELSOLIN. | ||||||||||||||||||
| SMART | SM00262. GEL. 4 hits. SM00153. VHP. 1 hit. [Graphical view] | ||||||||||||||||||
| SUPFAM | SSF47050. VHP. 1 hit. | ||||||||||||||||||
| PROSITE | PS51089. HP. 1 hit. [Graphical view] | ||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||
Other | |||||||||||||||||||
| ChiTaRS | SVIL. human. | ||||||||||||||||||
| EvolutionaryTrace | O95425. | ||||||||||||||||||
| GenomeRNAi | 6840. | ||||||||||||||||||
| NextBio | 26705. | ||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||
Entry information
| Entry name | SVIL_HUMAN | ||||||||
| Accession | Primary (citable) accession number: O95425 Secondary accession number(s): D3DRW9 Q9H1R7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 10 Human chromosome 10: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
