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Protein

40S ribosomal protein S15-A

Gene

rps1501

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S15 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S15-A
Gene namesi
Name:rps1501
Synonyms:rps15a
ORF Names:SPCC1393.03
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC1393.03.
PomBaseiSPCC1393.03. rps1501.

Subcellular locationi

GO - Cellular componenti

  • cytosolic small ribosomal subunit Source: PomBase
  • nucleolus Source: PomBase
  • nucleus Source: PomBase

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001300491 – 15340S ribosomal protein S15-AAdd BLAST153

Proteomic databases

MaxQBiO94715.
PRIDEiO94715.

Interactioni

Protein-protein interaction databases

BioGridi275470. 3 interactors.
MINTiMINT-4686451.

Structurei

3D structure databases

ProteinModelPortaliO94715.
SMRiO94715.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000111561.
InParanoidiO94715.
KOiK02958.
OMAiCACANGS.
OrthoDBiEOG092C5E45.
PhylomeDBiO94715.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiView protein in InterPro
IPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiView protein in Pfam
PF00203. Ribosomal_S19. 1 hit.
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00323. RIBOSOMAL_S19. 1 hit.

Sequencei

Sequence statusi: Complete.

O94715-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEEHDEAVR VAELRKKRSF RTFAYRGVEL EQLLDLSAEQ LVDLFHARAR
60 70 80 90 100
RRMLRGLGPN ASRFIRKLRK AKTEAPLNEK PATVKTHLRN MIILPEMVGS
110 120 130 140 150
VVGIYNGKLF NQVEIRPEMI GHYLGEFSIT YKPTKHGRPG IGATHSSRFI

PLK
Length:153
Mass (Da):17,519
Last modified:May 1, 1999 - v1
Checksum:i91591136899BF0AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB38159.1.
PIRiT40951.
RefSeqiNP_587961.1. NM_001022952.2.

Genome annotation databases

EnsemblFungiiSPCC1393.03.1; SPCC1393.03.1:pep; SPCC1393.03.
GeneIDi2538892.
KEGGispo:SPCC1393.03.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAB38159.1.
PIRiT40951.
RefSeqiNP_587961.1. NM_001022952.2.

3D structure databases

ProteinModelPortaliO94715.
SMRiO94715.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi275470. 3 interactors.
MINTiMINT-4686451.

Proteomic databases

MaxQBiO94715.
PRIDEiO94715.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC1393.03.1; SPCC1393.03.1:pep; SPCC1393.03.
GeneIDi2538892.
KEGGispo:SPCC1393.03.

Organism-specific databases

EuPathDBiFungiDB:SPCC1393.03.
PomBaseiSPCC1393.03. rps1501.

Phylogenomic databases

HOGENOMiHOG000111561.
InParanoidiO94715.
KOiK02958.
OMAiCACANGS.
OrthoDBiEOG092C5E45.
PhylomeDBiO94715.

Enzyme and pathway databases

ReactomeiR-SPO-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-SPO-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-SPO-72689. Formation of a pool of free 40S subunits.
R-SPO-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-SPO-72702. Ribosomal scanning and start codon recognition.
R-SPO-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-SPO-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-SPO-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiPR:O94715.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiView protein in InterPro
IPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiView protein in Pfam
PF00203. Ribosomal_S19. 1 hit.
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00323. RIBOSOMAL_S19. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS15A_SCHPO
AccessioniPrimary (citable) accession number: O94715
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 14, 2001
Last sequence update: May 1, 1999
Last modified: June 7, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.