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Protein

Zinc-type alcohol dehydrogenase-like protein C1773.06c

Gene

SPBC1773.06c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-3343-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc-type alcohol dehydrogenase-like protein C1773.06c (EC:1.-.-.-)
Gene namesi
ORF Names:SPBC1773.06c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1773.06c.
PomBaseiSPBC1773.06c.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 346346Zinc-type alcohol dehydrogenase-like protein C1773.06cPRO_0000339117Add
BLAST

Proteomic databases

MaxQBiO94564.

Interactioni

Protein-protein interaction databases

BioGridi276676. 11 interactions.
MINTiMINT-4685225.

Structurei

3D structure databases

ProteinModelPortaliO94564.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000294692.
InParanoidiO94564.
OMAiDELAYND.
OrthoDBiEOG7SV150.
PhylomeDBiO94564.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
IPR020843. PKS_ER.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SMARTiSM00829. PKS_ER. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
SSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O94564-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALRYVVHDE ISGFDQLKPE EYEVPQKLNP GEVLVKLKAA SLNYRDLIIT
60 70 80 90 100
KGLYPLPLQL PVVPGSDGAG IIEKVGEDVE GFEKGDSVVC NFFTNYLDGT
110 120 130 140 150
PTDFATHSAL GGTRDGCFQK YAVLPAHALV HAPKNLSFEE IATLPCAAVT
160 170 180 190 200
AWNGLFGSKE HQVKPGNNVL VLGTGGVSTF ALQFALAAGA NVTVTSSSDE
210 220 230 240 250
KLEFAKKLGA THTINYKKTP QWASPALKMT NGVGYHHVIE VGGEKTLPQS
260 270 280 290 300
IACLAKDGMI SMIGFVASEG TTPNLTSIIG QILNRNANIR GIFVGSVSMF
310 320 330 340
RDMVACIEAK DIHPVVDKVF PFDQLKEAYE YQWSQAHIGK VVLKID
Length:346
Mass (Da):37,321
Last modified:May 1, 1999 - v1
Checksum:i8CC3554C771DE0E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA21911.1.
PIRiT39671.
RefSeqiNP_595121.1. NM_001021028.2.

Genome annotation databases

EnsemblFungiiSPBC1773.06c.1; SPBC1773.06c.1:pep; SPBC1773.06c.
GeneIDi2540139.
KEGGispo:SPBC1773.06c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA21911.1.
PIRiT39671.
RefSeqiNP_595121.1. NM_001021028.2.

3D structure databases

ProteinModelPortaliO94564.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276676. 11 interactions.
MINTiMINT-4685225.

Proteomic databases

MaxQBiO94564.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC1773.06c.1; SPBC1773.06c.1:pep; SPBC1773.06c.
GeneIDi2540139.
KEGGispo:SPBC1773.06c.

Organism-specific databases

EuPathDBiFungiDB:SPBC1773.06c.
PomBaseiSPBC1773.06c.

Phylogenomic databases

HOGENOMiHOG000294692.
InParanoidiO94564.
OMAiDELAYND.
OrthoDBiEOG7SV150.
PhylomeDBiO94564.

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-3343-MONOMER.

Miscellaneous databases

PROiO94564.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
IPR020843. PKS_ER.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SMARTiSM00829. PKS_ER. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
SSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYGD6_SCHPO
AccessioniPrimary (citable) accession number: O94564
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: May 1, 1999
Last modified: June 8, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.