SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

O94506

- RSM1_SCHPO

UniProt

O94506 - RSM1_SCHPO

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
mRNA export factor rsm1
Gene
rsm1, SPCC1753.05
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed - Annotation score: 3 out of 5 - Protein predictedi

Functioni

Involved in the export of mRNA from the nucleus to the cytoplasm.1 Publication

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri40 – 174135C3HC-type
Add
BLAST

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
  2. zinc ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. mRNA export from nucleus Source: PomBase
Complete GO annotation...

Keywords - Biological processi

mRNA transport, Transport

Keywords - Ligandi

Metal-binding, RNA-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
mRNA export factor rsm1
Gene namesi
Name:rsm1
ORF Names:SPCC1753.05
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
ProteomesiUP000002485: Chromosome III

Organism-specific databases

PomBaseiSPCC1753.05.

Subcellular locationi

Cytoplasm. Nucleus 1 Publication

GO - Cellular componenti

  1. cytosol Source: PomBase
  2. nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 296296mRNA export factor rsm1
PRO_0000290653Add
BLAST

Proteomic databases

MaxQBiO94506.

Interactioni

Protein-protein interaction databases

BioGridi275558. 1 interaction.
MINTiMINT-4684763.
STRINGi4896.SPCC1753.05-1.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiNOG246473.
OrthoDBiEOG73RBN3.
PhylomeDBiO94506.

Family and domain databases

InterProiIPR013909. NIPA/Rsm1.
IPR012935. Znf_C3HC-like.
[Graphical view]
PfamiPF08600. Rsm1. 1 hit.
PF07967. zf-C3HC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O94506-1 [UniParc]FASTAAdd to Basket

« Hide

MSFPTDMETN EILDQLDKID ERNEDILLKS LKASKCTYKP WSREEFLRRL    50
LTYRSRWAYV NDPQIGEINC CLNGWLCESN NILVCDVCRN KINLTALQQV 100
DAENDSLNEL PEKTKERLEV SLKEEHQDNC LWRLHKFPPD IYHLSVSAEL 150
VQVGRRFNSL STRLVSTHLP EEMTLKRLEK VANKIRVDWE KEDAAVLLGI 200
ALTGWSEQVP GRLYVCNYCH RRLGVWNLQS EGQDFDVLEE HKKSCPWVIP 250
QPFTDLLGWQ QIFELLCKES IFQSTTKTMD VSQYTDYTFS LLQGLR 296
Length:296
Mass (Da):34,650
Last modified:May 1, 1999 - v1
Checksum:i4E921F1B37DE2211
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU329672 Genomic DNA. Translation: CAA22779.1.
PIRiT41128.
RefSeqiNP_588231.1. NM_001023221.2.

Genome annotation databases

EnsemblFungiiSPCC1753.05.1; SPCC1753.05.1:pep; SPCC1753.05.
GeneIDi2538984.
KEGGispo:SPCC1753.05.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CU329672 Genomic DNA. Translation: CAA22779.1 .
PIRi T41128.
RefSeqi NP_588231.1. NM_001023221.2.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

BioGridi 275558. 1 interaction.
MINTi MINT-4684763.
STRINGi 4896.SPCC1753.05-1.

Proteomic databases

MaxQBi O94506.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii SPCC1753.05.1 ; SPCC1753.05.1:pep ; SPCC1753.05 .
GeneIDi 2538984.
KEGGi spo:SPCC1753.05.

Organism-specific databases

PomBasei SPCC1753.05.

Phylogenomic databases

eggNOGi NOG246473.
OrthoDBi EOG73RBN3.
PhylomeDBi O94506.

Miscellaneous databases

NextBioi 20800159.

Family and domain databases

InterProi IPR013909. NIPA/Rsm1.
IPR012935. Znf_C3HC-like.
[Graphical view ]
Pfami PF08600. Rsm1. 1 hit.
PF07967. zf-C3HC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "Schizosaccharomyces pombe rsm1 genetically interacts with spmex67, which is involved in mRNA export."
    Yoon J.H.
    J. Microbiol. 42:32-36(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.
  3. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiRSM1_SCHPO
AccessioniPrimary (citable) accession number: O94506
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: May 1, 1999
Last modified: May 14, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi