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Protein

Uncharacterized transporter C417.10

Gene

SPCC417.10

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transporter C417.10
Gene namesi
ORF Names:SPCC417.10
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC417.10.
PomBaseiSPCC417.10.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei65 – 8723HelicalSequence analysisAdd
BLAST
Transmembranei104 – 12421HelicalSequence analysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence analysisAdd
BLAST
Transmembranei160 – 18021HelicalSequence analysisAdd
BLAST
Transmembranei192 – 21221HelicalSequence analysisAdd
BLAST
Transmembranei224 – 24421HelicalSequence analysisAdd
BLAST
Transmembranei292 – 31221HelicalSequence analysisAdd
BLAST
Transmembranei333 – 35321HelicalSequence analysisAdd
BLAST
Transmembranei357 – 37721HelicalSequence analysisAdd
BLAST
Transmembranei384 – 40421HelicalSequence analysisAdd
BLAST
Transmembranei416 – 43621HelicalSequence analysisAdd
BLAST
Transmembranei450 – 47021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • cell division site Source: PomBase
  • cell tip Source: PomBase
  • endoplasmic reticulum Source: PomBase
  • Golgi apparatus Source: PomBase
  • integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Endoplasmic reticulum, Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 508508Uncharacterized transporter C417.10PRO_0000372783Add
BLAST

PTM databases

SwissPalmiO94491.

Interactioni

Protein-protein interaction databases

MINTiMINT-4684639.

Structurei

3D structure databases

ProteinModelPortaliO94491.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000171758.
InParanoidiO94491.
KOiK08192.
OMAiMSSISID.
OrthoDBiEOG74BK1T.
PhylomeDBiO94491.

Family and domain databases

InterProiIPR004744. Dgal_transporter.
IPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00893. 2A0114. 1 hit.

Sequencei

Sequence statusi: Complete.

O94491-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSISIDEKL KDPESVQNKE ILDVDVGDLS PKGVDAAFNY ALDVDYDEID
60 70 80 90 100
PETERRLVRK IDCTIFPVMC LVYCIQFLDK TSNSYAVIMG LKEDLKMEGQ
110 120 130 140 150
MYSWSGTAFY LGYLVFEFPA SLLLQRFPLS KTLCVFLVIW GFLLCMTSVA
160 170 180 190 200
NYPGFIALRV LLGMMESAAS PGFILLTAQW YKRSEQQLRT SVWVAFNGLG
210 220 230 240 250
QILGSCMAYG LAKRTSLPMR GWKLIFIICG VLAIFLGFVI LAVVPDNPFK
260 270 280 290 300
AWFLTEEDRK LVVKRLRANK QGVGNNHFKL YQFKETMLDI RTWIMFVSSV
310 320 330 340 350
LLNIPNGGIG TFSSLLIKGT MGYDTLQTLL MGLPAGACEF GGLIAFGFLS
360 370 380 390 400
LFIHKRMVLA TITTCIALIG SCLLSFAGPP RAQLAGYYLL MVSPGAMIVM
410 420 430 440 450
FAIISSNASG YTKKVTVGVI YLIGYCVGNL IGPQTFKAAD APEYMPAKNT
460 470 480 490 500
MVGCYAATLV TFPALYYVNW RENKRRDQLA AEGKIEHRPN AEFEDLTDFE

NLDFRYTL
Length:508
Mass (Da):56,665
Last modified:May 1, 1999 - v1
Checksum:i8F2E44B7566AFFBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA22656.1.
PIRiT41345.
RefSeqiNP_588287.1. NM_001023277.2.

Genome annotation databases

EnsemblFungiiSPCC417.10.1; SPCC417.10.1:pep; SPCC417.10.
GeneIDi2539419.
KEGGispo:SPCC417.10.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA22656.1.
PIRiT41345.
RefSeqiNP_588287.1. NM_001023277.2.

3D structure databases

ProteinModelPortaliO94491.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4684639.

PTM databases

SwissPalmiO94491.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC417.10.1; SPCC417.10.1:pep; SPCC417.10.
GeneIDi2539419.
KEGGispo:SPCC417.10.

Organism-specific databases

EuPathDBiFungiDB:SPCC417.10.
PomBaseiSPCC417.10.

Phylogenomic databases

HOGENOMiHOG000171758.
InParanoidiO94491.
KOiK08192.
OMAiMSSISID.
OrthoDBiEOG74BK1T.
PhylomeDBiO94491.

Miscellaneous databases

NextBioi20800583.
PROiO94491.

Family and domain databases

InterProiIPR004744. Dgal_transporter.
IPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
TIGRFAMsiTIGR00893. 2A0114. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYC7A_SCHPO
AccessioniPrimary (citable) accession number: O94491
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.