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Protein

Probable metabolite transport protein C1271.09

Gene

SPBC1271.09

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable metabolite transport protein C1271.09
Gene namesi
ORF Names:SPBC1271.09
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1271.09.
PomBaseiSPBC1271.09.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 8282CytoplasmicSequence analysisAdd
BLAST
Transmembranei83 – 10321HelicalSequence analysisAdd
BLAST
Topological domaini104 – 11613ExtracellularSequence analysisAdd
BLAST
Transmembranei117 – 13721HelicalSequence analysisAdd
BLAST
Topological domaini138 – 1469CytoplasmicSequence analysis
Transmembranei147 – 16721HelicalSequence analysisAdd
BLAST
Topological domaini168 – 1714ExtracellularSequence analysis
Transmembranei172 – 19221HelicalSequence analysisAdd
BLAST
Topological domaini193 – 22230CytoplasmicSequence analysisAdd
BLAST
Transmembranei223 – 24321HelicalSequence analysisAdd
BLAST
Topological domaini244 – 25310ExtracellularSequence analysis
Transmembranei254 – 27421HelicalSequence analysisAdd
BLAST
Topological domaini275 – 30127CytoplasmicSequence analysisAdd
BLAST
Transmembranei302 – 32221HelicalSequence analysisAdd
BLAST
Topological domaini323 – 34018ExtracellularSequence analysisAdd
BLAST
Transmembranei341 – 36121HelicalSequence analysisAdd
BLAST
Topological domaini362 – 3687CytoplasmicSequence analysis
Transmembranei369 – 38921HelicalSequence analysisAdd
BLAST
Topological domaini390 – 3956ExtracellularSequence analysis
Transmembranei396 – 41621HelicalSequence analysisAdd
BLAST
Topological domaini417 – 43216CytoplasmicSequence analysisAdd
BLAST
Transmembranei433 – 45321HelicalSequence analysisAdd
BLAST
Topological domaini454 – 4607ExtracellularSequence analysis
Transmembranei461 – 48121HelicalSequence analysisAdd
BLAST
Topological domaini482 – 54362CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 543543Probable metabolite transport protein C1271.09PRO_0000310745Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi276283. 7 interactions.

Structurei

3D structure databases

ProteinModelPortaliO94342.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000214987.
InParanoidiO94342.
OMAiFTNFQID.
OrthoDBiEOG7FV40B.
PhylomeDBiO94342.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O94342-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGGWDESKY VDNGEDEVVR QVSEPSVEEP IEASVTRYRS DEEKLDDKSS
60 70 80 90 100
GAHVTEKEAE FDIEGGSRET SQWKHFLNVA VAGVALMSDG YCSNSIGTVI
110 120 130 140 150
TILRKLYPEE TTHNKSLQDI GMIAYVGTIV GQLSFGWYSD RFGRKNGMIT
160 170 180 190 200
ATIILIVSTA LCTGAYGYKG SINGMLSALI AYRFFLGIGI GAEYPCGSVA
210 220 230 240 250
ASESSNELKS GLRHAAFIVV TDGAIDFGFV VGALVPYILV CIFGEHHLRI
260 270 280 290 300
VWRLSIGLGL VIPCVLLPFR IAMKDPKTYV KHKVPLTKIP WLLVLKMYGF
310 320 330 340 350
RLFILCLIWF VYDLSAFAFG LYSSTIVDGV LPADASTARS FGWNVLINTF
360 370 380 390 400
YLPGALLGGV FSDLLGPKYC LITGLVLQSI FGFFMSGFYN QLVHKIAGFC
410 420 430 440 450
VIYGIFLTLG EFGPGGNIGL LASKTSPTAI RGVYYGIAAA IGKCGAIAGV
460 470 480 490 500
YAFGGDQVRN YFYAASAMAI FVAVLALLFV PKLKQTCIED EDKRFIQACI
510 520 530 540
DAGYGNPYNY EKNEPEQLEE PDRPPAFNPF LSATFSFHHI ILC
Length:543
Mass (Da):59,287
Last modified:May 1, 1999 - v1
Checksum:i91C79A1CDE477878
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA22199.1.
PIRiT39345.
RefSeqiNP_595141.1. NM_001021049.1.

Genome annotation databases

EnsemblFungiiSPBC1271.09.1; SPBC1271.09.1:pep; SPBC1271.09.
GeneIDi2539731.
KEGGispo:SPBC1271.09.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA22199.1.
PIRiT39345.
RefSeqiNP_595141.1. NM_001021049.1.

3D structure databases

ProteinModelPortaliO94342.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276283. 7 interactions.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC1271.09.1; SPBC1271.09.1:pep; SPBC1271.09.
GeneIDi2539731.
KEGGispo:SPBC1271.09.

Organism-specific databases

EuPathDBiFungiDB:SPBC1271.09.
PomBaseiSPBC1271.09.

Phylogenomic databases

HOGENOMiHOG000214987.
InParanoidiO94342.
OMAiFTNFQID.
OrthoDBiEOG7FV40B.
PhylomeDBiO94342.

Miscellaneous databases

PROiO94342.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.

Entry informationi

Entry nameiYHM9_SCHPO
AccessioniPrimary (citable) accession number: O94342
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: May 1, 1999
Last modified: July 6, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.