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Protein

Probable metabolite transport protein C1271.09

Gene

SPBC1271.09

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable metabolite transport protein C1271.09
Gene namesi
ORF Names:SPBC1271.09
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC1271.09.
PomBaseiSPBC1271.09.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 82CytoplasmicSequence analysisAdd BLAST82
Transmembranei83 – 103HelicalSequence analysisAdd BLAST21
Topological domaini104 – 116ExtracellularSequence analysisAdd BLAST13
Transmembranei117 – 137HelicalSequence analysisAdd BLAST21
Topological domaini138 – 146CytoplasmicSequence analysis9
Transmembranei147 – 167HelicalSequence analysisAdd BLAST21
Topological domaini168 – 171ExtracellularSequence analysis4
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21
Topological domaini193 – 222CytoplasmicSequence analysisAdd BLAST30
Transmembranei223 – 243HelicalSequence analysisAdd BLAST21
Topological domaini244 – 253ExtracellularSequence analysis10
Transmembranei254 – 274HelicalSequence analysisAdd BLAST21
Topological domaini275 – 301CytoplasmicSequence analysisAdd BLAST27
Transmembranei302 – 322HelicalSequence analysisAdd BLAST21
Topological domaini323 – 340ExtracellularSequence analysisAdd BLAST18
Transmembranei341 – 361HelicalSequence analysisAdd BLAST21
Topological domaini362 – 368CytoplasmicSequence analysis7
Transmembranei369 – 389HelicalSequence analysisAdd BLAST21
Topological domaini390 – 395ExtracellularSequence analysis6
Transmembranei396 – 416HelicalSequence analysisAdd BLAST21
Topological domaini417 – 432CytoplasmicSequence analysisAdd BLAST16
Transmembranei433 – 453HelicalSequence analysisAdd BLAST21
Topological domaini454 – 460ExtracellularSequence analysis7
Transmembranei461 – 481HelicalSequence analysisAdd BLAST21
Topological domaini482 – 543CytoplasmicSequence analysisAdd BLAST62

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003107451 – 543Probable metabolite transport protein C1271.09Add BLAST543

Proteomic databases

PRIDEiO94342.

Interactioni

Protein-protein interaction databases

BioGridi276283. 7 interactors.

Structurei

3D structure databases

ProteinModelPortaliO94342.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000214987.
InParanoidiO94342.
OMAiFTNFQID.
OrthoDBiEOG092C241Y.
PhylomeDBiO94342.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport-like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O94342-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGGWDESKY VDNGEDEVVR QVSEPSVEEP IEASVTRYRS DEEKLDDKSS
60 70 80 90 100
GAHVTEKEAE FDIEGGSRET SQWKHFLNVA VAGVALMSDG YCSNSIGTVI
110 120 130 140 150
TILRKLYPEE TTHNKSLQDI GMIAYVGTIV GQLSFGWYSD RFGRKNGMIT
160 170 180 190 200
ATIILIVSTA LCTGAYGYKG SINGMLSALI AYRFFLGIGI GAEYPCGSVA
210 220 230 240 250
ASESSNELKS GLRHAAFIVV TDGAIDFGFV VGALVPYILV CIFGEHHLRI
260 270 280 290 300
VWRLSIGLGL VIPCVLLPFR IAMKDPKTYV KHKVPLTKIP WLLVLKMYGF
310 320 330 340 350
RLFILCLIWF VYDLSAFAFG LYSSTIVDGV LPADASTARS FGWNVLINTF
360 370 380 390 400
YLPGALLGGV FSDLLGPKYC LITGLVLQSI FGFFMSGFYN QLVHKIAGFC
410 420 430 440 450
VIYGIFLTLG EFGPGGNIGL LASKTSPTAI RGVYYGIAAA IGKCGAIAGV
460 470 480 490 500
YAFGGDQVRN YFYAASAMAI FVAVLALLFV PKLKQTCIED EDKRFIQACI
510 520 530 540
DAGYGNPYNY EKNEPEQLEE PDRPPAFNPF LSATFSFHHI ILC
Length:543
Mass (Da):59,287
Last modified:May 1, 1999 - v1
Checksum:i91C79A1CDE477878
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA22199.1.
PIRiT39345.
RefSeqiNP_595141.1. NM_001021049.1.

Genome annotation databases

EnsemblFungiiSPBC1271.09.1; SPBC1271.09.1:pep; SPBC1271.09.
GeneIDi2539731.
KEGGispo:SPBC1271.09.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA22199.1.
PIRiT39345.
RefSeqiNP_595141.1. NM_001021049.1.

3D structure databases

ProteinModelPortaliO94342.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi276283. 7 interactors.

Proteomic databases

PRIDEiO94342.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBC1271.09.1; SPBC1271.09.1:pep; SPBC1271.09.
GeneIDi2539731.
KEGGispo:SPBC1271.09.

Organism-specific databases

EuPathDBiFungiDB:SPBC1271.09.
PomBaseiSPBC1271.09.

Phylogenomic databases

HOGENOMiHOG000214987.
InParanoidiO94342.
OMAiFTNFQID.
OrthoDBiEOG092C241Y.
PhylomeDBiO94342.

Miscellaneous databases

PROiO94342.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport-like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYHM9_SCHPO
AccessioniPrimary (citable) accession number: O94342
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 13, 2007
Last sequence update: May 1, 1999
Last modified: November 30, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.