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Protein

Putative G3BP-like protein

Gene

nxt3

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Probable scaffold protein that may be involved in mRNA transport.Curated

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

mRNA transport, Transport

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative G3BP-like protein
Gene namesi
Name:nxt3
ORF Names:SPBP8B7.11
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBP8B7.11.
PomBaseiSPBP8B7.11. nxt3.

Subcellular locationi

GO - Cellular componenti

  • cytoplasm Source: PomBase
  • cytosol Source: PomBase
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 434434Putative G3BP-like proteinPRO_0000194802Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei145 – 1451Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO94260.

PTM databases

iPTMnetiO94260.

Interactioni

Protein-protein interaction databases

BioGridi277875. 12 interactions.
IntActiO94260. 1 interaction.
MINTiMINT-4682650.

Structurei

3D structure databases

ProteinModelPortaliO94260.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini18 – 134117NTF2PROSITE-ProRule annotationAdd
BLAST
Domaini315 – 38672RRMPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 NTF2 domain.PROSITE-ProRule annotation
Contains 1 RRM (RNA recognition motif) domain.PROSITE-ProRule annotation

Phylogenomic databases

InParanoidiO94260.
OMAiVEFEMAS.
OrthoDBiEOG7P2Z3G.
PhylomeDBiO94260.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR002075. NTF2.
IPR032710. NTF2-like_dom.
IPR018222. Nuclear_transport_factor_2_euk.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF02136. NTF2. 1 hit.
PF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS50177. NTF2_DOMAIN. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O94260-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTAENATLLE PVLGKDEIGW MFVQEYYTYL NKEPNRLHCF YTKKSTLIHG
60 70 80 90 100
DEGESISLCH GQQEIHNKIL DLDFQNCKVL ISNVDSLASS NGGIVIQVLG
110 120 130 140 150
EMSNKGKLSR KFAQTFFLAE QPNGYFVLND IFRFLREDVE EEEESPDAVE
160 170 180 190 200
KEKKDVASEP YVNGVQSQEH LPSAKEEGHY QDPAATENNF ATAALISNET
210 220 230 240 250
DSLNQATLAV PEEPVIQVTE ASVPSFVSQQ ENQLQDEALT SNSKNADAIG
260 270 280 290 300
ASDANVATAP KSWADLIARN HPDVKSQASV SSTASTTGQT VKGVNADQTQ
310 320 330 340 350
QPTAPYTQSN ELLETSVFVK NIPPETSDVS LKSAMSIFGP VKAIEFARRK
360 370 380 390 400
GTAYVDFVNH ECVQLALNKK TLQINNATLN IEERRRLFSG KFNKSGDKKS
410 420 430
NDNYNGMKRN FRKGNRGAFD GRSKEVTTSK KQNN
Length:434
Mass (Da):47,972
Last modified:May 1, 1999 - v1
Checksum:i365B41597930BD35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA21796.1.
PIRiT40805.
RefSeqiNP_596518.1. NM_001022439.2.

Genome annotation databases

EnsemblFungiiSPBP8B7.11.1; SPBP8B7.11.1:pep; SPBP8B7.11.
GeneIDi2541364.
KEGGispo:SPBP8B7.11.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA. Translation: CAA21796.1.
PIRiT40805.
RefSeqiNP_596518.1. NM_001022439.2.

3D structure databases

ProteinModelPortaliO94260.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi277875. 12 interactions.
IntActiO94260. 1 interaction.
MINTiMINT-4682650.

PTM databases

iPTMnetiO94260.

Proteomic databases

MaxQBiO94260.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPBP8B7.11.1; SPBP8B7.11.1:pep; SPBP8B7.11.
GeneIDi2541364.
KEGGispo:SPBP8B7.11.

Organism-specific databases

EuPathDBiFungiDB:SPBP8B7.11.
PomBaseiSPBP8B7.11. nxt3.

Phylogenomic databases

InParanoidiO94260.
OMAiVEFEMAS.
OrthoDBiEOG7P2Z3G.
PhylomeDBiO94260.

Miscellaneous databases

NextBioi20802473.
PROiO94260.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
3.30.70.330. 1 hit.
InterProiIPR002075. NTF2.
IPR032710. NTF2-like_dom.
IPR018222. Nuclear_transport_factor_2_euk.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF02136. NTF2. 1 hit.
PF00076. RRM_1. 1 hit.
[Graphical view]
SMARTiSM00360. RRM. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
SSF54928. SSF54928. 1 hit.
PROSITEiPS50177. NTF2_DOMAIN. 1 hit.
PS50102. RRM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-145, IDENTIFICATION BY MASS SPECTROMETRY.

Entry informationi

Entry nameiG3BP_SCHPO
AccessioniPrimary (citable) accession number: O94260
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2001
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.