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Protein

Midasin

Gene

mdn1

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi159 – 1668ATPSequence analysis
Nucleotide bindingi474 – 4818ATPSequence analysis
Nucleotide bindingi901 – 9088ATPSequence analysis
Nucleotide bindingi1193 – 12008ATPSequence analysis
Nucleotide bindingi1566 – 15738ATPSequence analysis
Nucleotide bindingi1876 – 18838ATPSequence analysis

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Midasin
Alternative name(s):
MIDAS-containing protein
Gene namesi
Name:mdn1
ORF Names:SPCC737.08
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:SPCC737.08.
PomBaseiSPCC737.08.

Subcellular locationi

GO - Cellular componenti

  • mitotic spindle pole body Source: PomBase
  • nucleus Source: PomBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 47174717MidasinPRO_0000363386Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei593 – 5931Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiO94248.
PRIDEiO94248.

PTM databases

iPTMnetiO94248.

Interactioni

Protein-protein interaction databases

MINTiMINT-4682571.

Structurei

3D structure databases

ProteinModelPortaliO94248.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4505 – 4707203VWFAPROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi3929 – 4321393Glu-richAdd
BLAST
Compositional biasi4036 – 4157122Asp-richAdd
BLAST

Sequence similaritiesi

Belongs to the midasin family.Curated
Contains 1 VWFA domain.PROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000164494.
InParanoidiO94248.
KOiK14572.
OMAiAHPNFRV.
OrthoDBiEOG7JMGNQ.
PhylomeDBiO94248.

Family and domain databases

Gene3Di3.40.50.300. 9 hits.
3.40.50.410. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011704. ATPase_dyneun-rel_AAA.
IPR012099. Midasin.
IPR027417. P-loop_NTPase.
IPR002035. VWF_A.
[Graphical view]
PANTHERiPTHR22908:SF66. PTHR22908:SF66. 1 hit.
PfamiPF07728. AAA_5. 8 hits.
[Graphical view]
PIRSFiPIRSF010340. Midasin. 1 hit.
SMARTiSM00382. AAA. 5 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 9 hits.
SSF53300. SSF53300. 1 hit.
PROSITEiPS50234. VWFA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O94248-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVLIEWVAI YPQIYDILEH INYVPSNTLQ RLRLHQPWSK IDYDVWFLYA
60 70 80 90 100
SDEIRETCKV KYYGETKTYG EVFVLENERI SQLHRLFVSW TVSERAEHLK
110 120 130 140 150
NLLFDAGLSN LPLVELGGNV FFNSHVPLPC SLVLTKSTQE NLNRITPYLV
160 170 180 190 200
QKRPILLAGP EGIGKKFLIT QIAAKLGQQI IRIHLSDSTD PKMLIGTYTS
210 220 230 240 250
PKPGEFEWQP GVLTQAVITG KWILFTNIEH APSEVLSVLL PLLEKRQLVI
260 270 280 290 300
PSRGETIYAK GSFQMFATSS MKTKILGQRL WQILDLTYQP DECVEVVSTL
310 320 330 340 350
YPVLSIICPT LYSVYKDIFD LFSQRSFLAT SKIYRRLCLR DFYKFIKRVA
360 370 380 390 400
FLYHKFMIPS DHVVISQELQ DAVFKEAIDM FGAFIPSRDG FDLVVRNVAI
410 420 430 440 450
ELNIPPEKAL QLRYSIPVFQ NLEHNINIGR CSLKKLSTIR SCSTNSYAFT
460 470 480 490 500
SSSLGLLEQL AAGVQTNEPL LLVGETGTGK TTTIQLLAGL LGQKVTVINM
510 520 530 540 550
SQQTESSDML GGYKPINAST LGLPLHERFI DIFEQTFSSK KNAKFISMAS
560 570 580 590 600
TSARRFRWKT CLKIWKEACK LSKTVLDGQQ PLPNPQKRQK RLSNQVELRN
610 620 630 640 650
QWAKFEKEVE DFEKVLTGGS NGFMFSFVEG ALVKAVRSGH WVLLDEINLA
660 670 680 690 700
SLETLEPIGQ LLSSYESGIL LSERGDITPI TPHKNFRLFG CMNPSTDVGK
710 720 730 740 750
RELEPSFRSR FTEIYVHSPD QNLDDLLSII QKYIGSLCIG NEHVIREVAE
760 770 780 790 800
LYQVAKSLSL DGSLVDGAGQ RPHYTVRTLS RTLSYVTEIA PIYGLRRSLY
810 820 830 840 850
EGFCMSFLTL LDHTSESLLY NHVVRFTLGE LNRDQQNAIL KQIPKVPDHS
860 870 880 890 900
SYIAFCHYWL RRGSFPVEEQ EHYIITPFVQ KNLLNIARAC STRMFPILIQ
910 920 930 940 950
GPTSSGKTSM IEYVAKKTGH KFVRINNHEH TDLQEYIGTY VTDDNGSLSF
960 970 980 990 1000
REGVLVEALR NGYWIVLDEL NLAPTDVLEA LNRLLDDNRE LFIPETQVLV
1010 1020 1030 1040 1050
KPHPEFMLFA TQNPPGVYAG RKHLSRAFRN RFLEIHFDDI PENELETILH
1060 1070 1080 1090 1100
KRCKIAPSYA AKIVQVFREL SLRRQTTRIF EQKNSFATLR DLFRWAFREA
1110 1120 1130 1140 1150
VGYQQLAENG YMLLAERARD QKDKLAVQEV IEKVMKVKID TDGIYNLDSM
1160 1170 1180 1190 1200
EIFQDMSLKE GPLSKVVWTR PMIRLFCLVW RCLLAKEPVL LVGDTGCGKT
1210 1220 1230 1240 1250
TVCQILAECL HKELHIINAH QDTENGDIIG AQRPVRNRSA VNYSLHSQLC
1260 1270 1280 1290 1300
EKFNVQESLD SIDDLIEKFE KLSSSEKNDN LSNLIERQII KYRSLFEWHD
1310 1320 1330 1340 1350
GALVTAMKQG DFFLLDEISL ADDSVLERLN SVLELSRTLT LVEHSNAAVS
1360 1370 1380 1390 1400
LTAKDGFAFF ATMNPGGDYG KKELSPALRN RFTEIWVPPM VDTEDILKIV
1410 1420 1430 1440 1450
EGKLHNNKIE LARPLVEYAK WHANEYLYTD VISIRDVLSA VEFINACEIL
1460 1470 1480 1490 1500
DLNLVLFNAV SMVFIDALGS FTTFSLSNNL ASLHAERQRC FAKLNELAGS
1510 1520 1530 1540 1550
NIMASKSADI SIKFSDSSFF IGDFGIPLGD SVESDSTYSL HTDTTLMNAS
1560 1570 1580 1590 1600
KVLRALQVLK PILLEGSPGV GKTSLITALA RETGHQLVRI NLSDQTDLMD
1610 1620 1630 1640 1650
LFGSDVPVEG GEGGQFAWRD APFLAAMRNG HWVLLDELNL ASQSVLEGLN
1660 1670 1680 1690 1700
ACLDHRNEAY IPELDKVFKA HPNFRVFAAQ NPQHQGGGRK GLPRSFINRF
1710 1720 1730 1740 1750
SVVYVEALKE KDMIEIAACN YHQVNEDWRL KIIKFMFRLQ DNIEKDISFG
1760 1770 1780 1790 1800
SFGSPWEFNL RDTLRWLQLL NDAPKYTCVS PADYLEVMVL HRMRTVEDRV
1810 1820 1830 1840 1850
RTCELFKEVF DIDYEPRTIG FSLSSQCFKV GHSLLVRDVE RQKTLLDSQN
1860 1870 1880 1890 1900
ILQSQLPVLE SVITCINKKW PCILVGDTAT GKTCILRLLA AIAGAKIKEM
1910 1920 1930 1940 1950
AVNSDTDTMD LIGEYEQIDI SRKASELFTD LSQQLLNIVI KYRNFDNIFR
1960 1970 1980 1990 2000
ETSLYTLTTT SFKTHSQAFT LLQKVVDQLD QLKIHETLVH SLGDIHEKAR
2010 2020 2030 2040 2050
KLLAEFSASP AGRFEWFDGY LLKAVEEGHW FVLDNANLCS PAVLDRLNSL
2060 2070 2080 2090 2100
LEHKGVLIVN EKTTEDGHPK TIKPHPNFRL FLTVNPVYGE LSRAMRNRGV
2110 2120 2130 2140 2150
EIFLLKEALT EIDKKQMSLL EPAPISSAVD TLASNISYIK YVFETMGKIE
2160 2170 2180 2190 2200
IDGNYMYIAH AIILALFSPR QLKLLRKVLL TNPQFSLSIK ADAELLLTLK
2210 2220 2230 2240 2250
NLVQKIYCAD YFNHMDLKAS RFMDIYEYPV QLREVVGLIQ TINDFQSVIL
2260 2270 2280 2290 2300
TSHLELPETY ASGLLFVSAH EILDLTEEVN RLAVSTSNST YLLKSASAVY
2310 2320 2330 2340 2350
HNVSSFKGST PSLWNLLNQF SKFLIEIASA NSNIVYKLSY DVIRHFLKLV
2360 2370 2380 2390 2400
VLWKNIYVWT NVPDCDISRF YCYTKMLGEW MFTLTEKTKL LESFLPKDSL
2410 2420 2430 2440 2450
EKFSELQNLS TGLHMQAIWD KWHAFVPRTY DQWSLWNTVD KLLTQYVNAN
2460 2470 2480 2490 2500
IPSISMETTA CEVVGTSLSL LNKVLVENEV GDIYSYLKIL GKGVNELKSS
2510 2520 2530 2540 2550
KQVILPENLV NLFNCLASLD LLHIFIKYTT SSFFLTDDFV RFIRVCFHSR
2560 2570 2580 2590 2600
ISGNLLTLLH GISFDSTKAV APVLTYFDFC SLTTGNILGR IALAFTSIDE
2610 2620 2630 2640 2650
NANLESANIF EHARLALLQH FMDHSSLLAE DSSTKMNLIL LQRYAVIISI
2660 2670 2680 2690 2700
FLDQGKCEKA NDLITKLSLP YEELAENFVS ILEACKAFLV ANSEFISYTY
2710 2720 2730 2740 2750
TERFIHSLRF LKDSWLSSNQ QKMLKNQGMA YIYFASGMLL VYVPDKPFDP
2760 2770 2780 2790 2800
ALLPLLTVES LRHYLESLYK ESQILEIAES LNSGKVNSVM RRLVSTEISN
2810 2820 2830 2840 2850
TPNIDSSFST VYRSLNESIV PLYSELEFFM KSVVLNQYIF ELAMRLSKES
2860 2870 2880 2890 2900
NIAVVEEAKS FVTKWKAYIE RIREAYPQFV DVYELILSFI SFMIYGIELL
2910 2920 2930 2940 2950
MFEAKRRLDE RSQILSTLIL TLVDPSSFAR SLSFDDVSNL IEQIKVLDLN
2960 2970 2980 2990 3000
DSIRFEIYLF LASRLCSEKQ HSSDTHSLAN SFVLLANEFY IHNAKIKQKE
3010 3020 3030 3040 3050
LEEIEEKNRL YRQREFNFDK NDYLKVFINY DDEVEPEVEP EVVIERKRFL
3060 3070 3080 3090 3100
QLQFAFWSLY NEIYSEKMNV IPLEQLMNTG SYLAKKIKVK NPDMIASSGF
3110 3120 3130 3140 3150
DIVSVVLMMG VKSTNERQYW TPPVYNFYSD PNPSKAIEVR DLIKIVESRA
3160 3170 3180 3190 3200
ISLIKNWPEN FVLRGLKDAI DAILNLSPFS PIAEYLSKLE RVFHLLSEWE
3210 3220 3230 3240 3250
KLASREYSLA NEMDLIKKKI IDWRKFELSN WNNLLKLEEY KLSERVYPRL
3260 3270 3280 3290 3300
YSILQFIILK PFFENSKFTK QNLCESASII VQFITDLTVG EFQLCLKCLL
3310 3320 3330 3340 3350
SFSQHAASLR ICHGIDAMLL NIYHYFEQFL SKVSEAIHTQ KQSLENSIKE
3360 3370 3380 3390 3400
RILLMSWKDT NVYALKESAK KSHAELFKVL HRYREVLRQP VSSYLSQKHD
3410 3420 3430 3440 3450
WDSLLDTENN SAMWVAKKVN LSPSYIEKMD TEIMKLVPVR FSNTPTTLRL
3460 3470 3480 3490 3500
MWTLFANVEK PGSTFTNMVS NLITDARELM KLTPETINDD NLSEIKHLKS
3510 3520 3530 3540 3550
RKHLLLTETF KTLKAFGLQY RVKAGIEENL SNLRNLLAVI PTFPVTSLSI
3560 3570 3580 3590 3600
EKVDRSLMKS LDFIPKFQTL AGHQHNDLSV PEVQKGVGLF NSMLSLQLGE
3610 3620 3630 3640 3650
RAQLVEFTNE LLALKNVYSE VGVNGSPLES FNNSSFNEVS SLGYDHDFEN
3660 3670 3680 3690 3700
RAQAVSMLCQ IYAIVIQKHS SISPTASFQS IGHELSRFAD LLSNKLFPSS
3710 3720 3730 3740 3750
IPLYASADKV SSIRDQQKGI NDLIEYCRKK RTELPELSYC FKHLVSLQSL
3760 3770 3780 3790 3800
KSISRTQVDL TNDEFLNLMN FVLNLFDSLL SSIETATKNM RTFKELAETS
3810 3820 3830 3840 3850
SFIEMSSCFS KVLRAFNLKF QSMKLSSLKE KLRSSSVDKM SCQLLMLFLP
3860 3870 3880 3890 3900
VCEQFINLAE SVLDYFINVH NSNLDSLSKI STLFFMVANN GFCSPDLPQE
3910 3920 3930 3940 3950
GKSNSGELES GTGLGSGVGA EDITNTLNED DDLEELANEE DTANQSDLDE
3960 3970 3980 3990 4000
SEARELESDM NGVTKDSVVS ENENSDSEEE NQDLDEEVND IPEDLSNSLN
4010 4020 4030 4040 4050
EKLWDEPNEE DLLETEQKSN EQSAANNESD LVSKEDDNKA LEDKDRQEKE
4060 4070 4080 4090 4100
DEEEMSDDVG IDDEIQPDIQ ENNSQPPPEN EDHLDLPEDL KLDEKEGDVS
4110 4120 4130 4140 4150
KDSDLEDMDM EAADENKEEA DAEKDEPMQD FEDPLEENNT LDEDIQQDDF
4160 4170 4180 4190 4200
SDLAEDDEKM NEDGFEENVQ ENEESTEDGV KSDEELEQGE VPEDQAIDNH
4210 4220 4230 4240 4250
PKMDAKSTFA SAEADEENTD KGIVGENEEL GEEDGAAESG VRGNGTADGE
4260 4270 4280 4290 4300
FSSAEQVQKG EDTSTPKEAM SEADRQYQSL GDHLREWQQA NRIHEWEDLT
4310 4320 4330 4340 4350
ESQSQAFDDS EFMHVKEDEE EDLQALGNAE KDQIKSIDRD ESANQNPDSM
4360 4370 4380 4390 4400
NSTNIAEDEA DEVGDKQLQD GQDISDIKQT GEDTLPTEFG SINQSEKVFE
4410 4420 4430 4440 4450
LSEDEDIEDE LPDYNVKITN LPAAMPIDEA RDLWNKHEDS TKQLSIELCE
4460 4470 4480 4490 4500
QLRLILEPTL ATKMQGDFRT GKRLNMKRII PYIASQFKKD KIWMRRVKPS
4510 4520 4530 4540 4550
KRTYQVMISI DDSKSMSESG STVLALETLA LVTKALSLLE VGQIAVMKFG
4560 4570 4580 4590 4600
EQPELLHPFD KQFSSESGVQ MFSHFTFEQS NTNVLALADA SMKCFNYANT
4610 4620 4630 4640 4650
ASHHRSNSDI RQLEIIISDG ICEDHDSIRK LLRRAQEEKV MIVFVILDNV
4660 4670 4680 4690 4700
NTQKKSSILD IKKVYYDTKE DGTMDLKIQP YIDEFAFDYY LVVRNIEELP
4710
QLLSSALRQW FQQMSNT
Length:4,717
Mass (Da):537,787
Last modified:May 1, 1999 - v1
Checksum:iB2B08A69419EF502
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA20864.1.
PIRiT41581.
RefSeqiNP_588370.1. NM_001023361.2.

Genome annotation databases

EnsemblFungiiSPCC737.08.1; SPCC737.08.1:pep; SPCC737.08.
GeneIDi2539491.
KEGGispo:SPCC737.08.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329672 Genomic DNA. Translation: CAA20864.1.
PIRiT41581.
RefSeqiNP_588370.1. NM_001023361.2.

3D structure databases

ProteinModelPortaliO94248.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

MINTiMINT-4682571.

PTM databases

iPTMnetiO94248.

Proteomic databases

MaxQBiO94248.
PRIDEiO94248.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPCC737.08.1; SPCC737.08.1:pep; SPCC737.08.
GeneIDi2539491.
KEGGispo:SPCC737.08.

Organism-specific databases

EuPathDBiFungiDB:SPCC737.08.
PomBaseiSPCC737.08.

Phylogenomic databases

HOGENOMiHOG000164494.
InParanoidiO94248.
KOiK14572.
OMAiAHPNFRV.
OrthoDBiEOG7JMGNQ.
PhylomeDBiO94248.

Miscellaneous databases

NextBioi20800653.
PROiO94248.

Family and domain databases

Gene3Di3.40.50.300. 9 hits.
3.40.50.410. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR011704. ATPase_dyneun-rel_AAA.
IPR012099. Midasin.
IPR027417. P-loop_NTPase.
IPR002035. VWF_A.
[Graphical view]
PANTHERiPTHR22908:SF66. PTHR22908:SF66. 1 hit.
PfamiPF07728. AAA_5. 8 hits.
[Graphical view]
PIRSFiPIRSF010340. Midasin. 1 hit.
SMARTiSM00382. AAA. 5 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 9 hits.
SSF53300. SSF53300. 1 hit.
PROSITEiPS50234. VWFA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Schizosaccharomyces pombe."
    Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.
    , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P.
    Nature 415:871-880(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 972 / ATCC 24843.
  2. "ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe."
    Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M.
    Nat. Biotechnol. 24:841-847(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  3. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-593, IDENTIFICATION BY MASS SPECTROMETRY.

Entry informationi

Entry nameiMDN1_SCHPO
AccessioniPrimary (citable) accession number: O94248
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.