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Protein
Submitted name:

LjOtxA

Gene

LjOtxA

Organism
Lethenteron camtschaticum (Japanese lamprey) (Lampetra japonica)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi39 – 98HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LjOtxAImported
Gene namesi
Name:LjOtxAImported
OrganismiLethenteron camtschaticum (Japanese lamprey) (Lampetra japonica)Imported
Taxonomic identifieri980415 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataCyclostomataHyperoartiaPetromyzontiformesPetromyzontidaeLethenteron

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Structurei

3D structure databases

ProteinModelPortaliO93488.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 97HomeoboxInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotation

Phylogenomic databases

HOVERGENiHBG004028.

Family and domain databases

CDDicd00086. homeodomain. 1 hit.
InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR003025. Otx_TF.
IPR013851. Otx_TF_C.
PfamiView protein in Pfam
PF00046. Homeobox. 1 hit.
PF03529. TF_Otx. 1 hit.
PRINTSiPR01255. OTXHOMEOBOX.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O93488-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMSYLKQSPY AMNGLGLGAP GMELLHHPAV AYPGPNRKQR RERTTFTRAQ
60 70 80 90 100
LDVLEALFSK TRYPDIFMRE EVALKINLPE SRVQVWFKNR RAKCRQQQQS
110 120 130 140 150
GGQSKARAAK KKSTPPRESS SESTASSQYT PPSSSAAAPQ ASAASVAIWS
160 170 180 190 200
PASISPMGDH LTTTAASCMQ RSSAYAMTYS QAYSQASAAA GYSGSGSYFG
210 220 230 240 250
GVDCGSYLPA SVHPQLPAAG ATLSPMASSM AGGHIGQAAA SHGGALGAPG
260 270 280 290
YAGGGLPFNS PDCLDYKEQA ASWKFGFNPA DCLDYKDQPS SWKFQVL
Length:297
Mass (Da):31,469
Last modified:November 1, 1998 - v1
Checksum:i42AADD3F6A011D4F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012299 mRNA. Translation: BAA33409.1.

Similar proteinsi

Entry informationi

Entry nameiO93488_LETCA
AccessioniPrimary (citable) accession number: O93488
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 27, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)