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Protein
Submitted name:

Chromobox protein (CHCB3)

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-GGA-2559580. Oxidative Stress Induced Senescence.
R-GGA-3108214. SUMOylation of DNA damage response and repair proteins.
R-GGA-4570464. SUMOylation of RNA binding proteins.

Names & Taxonomyi

Protein namesi
Submitted name:
Chromobox protein (CHCB3)Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

PTM / Processingi

Proteomic databases

PaxDbiO93482.
PRIDEiO93482.

Expressioni

Gene expression databases

BgeeiENSGALG00000007063.
ExpressionAtlasiO93482. baseline.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000011426.

Structurei

3D structure databases

ProteinModelPortaliO93482.
SMRiO93482. Positions 8-65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 6959ChromoInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2748. Eukaryota.
ENOG41122KC. LUCA.
HOGENOMiHOG000231219.
HOVERGENiHBG005257.
KOiK11452.
OrthoDBiEOG091G06XV.
PhylomeDBiO93482.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 1 hit.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O93482-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELPAVGEHV FAVESIEKKR IRKGRVEYLV KWRGWSPKYN TWEPEENILD
60 70 80 90 100
PRLLIAFQNR ERQEQLMGYR KRGPKPKPLV VQLPSFARRS NILTGLQDPT
110 120 130 140 150
VDTRPKLDLG SSGKSQQHQY ELNSKKHHQY QPNGKESGVK HQSHSKGKYY
160 170 180 190 200
YQLNSKKHHH YQPDPKMYEP HYHPSGKEPQ GQACLDSTKS PLGAHPDKWA
210 220 230 240 250
HGAAKNLLGP VKNLAAESKN GAEKNLSSGT GPPPRDRVTS NGLGGKMKIV
260 270 280 290 300
KNKNKNGRIV IVMSKYMENG MQAVKIKSGE PPRKRAPEER TAKKGGEEKL
310 320 330 340 350
EAWRKPGEER AVGSNGLSAA EGESRQPAAE LQEGPRKPSP GKELPLPVAE
360 370 380 390 400
QPLQLTTKPD LVPWSLSPGR EHSPSSMGLN LSSPGARKRC LSEPHGDREP
410 420 430 440 450
GKKRLTSRSI SAPTCLGPER PELPAQPEVI LLDSDLDEPI DLRCVKPRAE
460 470 480 490 500
GEAALVQVKP EEPPAPAEQP PVEPPQQPRQ AAEEEEEEEA EGLREFKPFF
510 520
GNIIITDVTA NCLTVTFKEY VTV
Length:523
Mass (Da):58,185
Last modified:November 1, 1998 - v1
Checksum:i764194A49676E026
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB005619 mRNA. Translation: BAA33402.1.
RefSeqiNP_989973.1. NM_204642.1.
UniGeneiGga.49.

Genome annotation databases

GeneIDi395354.
KEGGigga:395354.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB005619 mRNA. Translation: BAA33402.1.
RefSeqiNP_989973.1. NM_204642.1.
UniGeneiGga.49.

3D structure databases

ProteinModelPortaliO93482.
SMRiO93482. Positions 8-65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000011426.

Proteomic databases

PaxDbiO93482.
PRIDEiO93482.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi395354.
KEGGigga:395354.

Organism-specific databases

CTDi8535.

Phylogenomic databases

eggNOGiKOG2748. Eukaryota.
ENOG41122KC. LUCA.
HOGENOMiHOG000231219.
HOVERGENiHBG005257.
KOiK11452.
OrthoDBiEOG091G06XV.
PhylomeDBiO93482.

Enzyme and pathway databases

ReactomeiR-GGA-2559580. Oxidative Stress Induced Senescence.
R-GGA-3108214. SUMOylation of DNA damage response and repair proteins.
R-GGA-4570464. SUMOylation of RNA binding proteins.

Gene expression databases

BgeeiENSGALG00000007063.
ExpressionAtlasiO93482. baseline.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 1 hit.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO93482_CHICK
AccessioniPrimary (citable) accession number: O93482
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.