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Protein
Submitted name:

Chromobox protein (CHCB1)

Gene

CBX1

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • actin binding Source: AgBase
  • histone methyltransferase binding Source: Ensembl
  • protein homodimerization activity Source: Ensembl

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Chromobox protein (CHCB1)Imported
Gene namesi
Name:CBX1Imported
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 27

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000000230.

Interactioni

GO - Molecular functioni

  • actin binding Source: AgBase
  • histone methyltransferase binding Source: Ensembl
  • protein homodimerization activity Source: Ensembl

Protein-protein interaction databases

STRINGi9031.ENSGALP00000000308.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 79ChromoInterPro annotationAdd BLAST59
Domaini117 – 175ChromoInterPro annotationAdd BLAST59

Phylogenomic databases

eggNOGiENOG410IUAA. Eukaryota.
ENOG4111H4A. LUCA.
GeneTreeiENSGT00510000046310.
HOGENOMiHOG000220852.
HOVERGENiHBG000400.
KOiK11585.
OMAiQTWEPED.
OrthoDBiEOG091G0RBS.
TreeFamiTF350503.

Family and domain databases

InterProiView protein in InterPro
IPR000953. Chromo/chromo_shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
PfamiView protein in Pfam
PF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
PRINTSiPR00504. CHROMODOMAIN.
SMARTiView protein in SMART
SM00298. CHROMO. 2 hits.
SM00300. ChSh. 1 hit.
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiView protein in PROSITE
PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.

Sequencei

Sequence statusi: Complete.

O93480-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN
60 70 80 90 100
TWEPEENLDC PDLIAEFLQS QKTAHESEKS EGSKRKAESD TEDKGEESKP
110 120 130 140 150
KKKKEESEKP RGFARGFEPE RIIGATDSSG ELMFLMKWKN SDEADLVPAK
160 170 180
EANIKCPQVV ISFYEERLTW HSYPSEDDDK KEDKN
Length:185
Mass (Da):21,538
Last modified:November 1, 1998 - v1
Checksum:i4447596DC12A3EDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000617 Genomic DNA. No translation available.
AB005617 mRNA. Translation: BAA33400.1.
RefSeqiNP_989663.1. NM_204332.1.
XP_015154963.1. XM_015299477.1.
XP_015154964.1. XM_015299478.1.
UniGeneiGga.25863.

Genome annotation databases

EnsembliENSGALT00000078023; ENSGALP00000049721; ENSGALG00000033926.
GeneIDi374237.
KEGGigga:374237.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO93480_CHICK
AccessioniPrimary (citable) accession number: O93480
Secondary accession number(s): H9L191
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: June 7, 2017
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported