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Protein
Submitted name:

Chromobox protein (CHCB1)

Gene

CBX1

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromobox protein (CHCB1)Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:CBX1Imported
OrganismiGallus gallus (Chicken)
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 27

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

BgeeiENSGALG00000000230.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000000308.

Structurei

3D structure databases

SMRiO93480. Positions 27-80, 104-176.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini21 – 7959ChromoInterPro annotationAdd
BLAST
Domaini117 – 17559ChromoInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IUAA. Eukaryota.
ENOG4111H4A. LUCA.
GeneTreeiENSGT00510000046310.
HOGENOMiHOG000220852.
HOVERGENiHBG000400.
KOiK11585.
OMAiWKGTDDA.
OrthoDBiEOG091G0RBS.
PhylomeDBiO93480.
TreeFamiTF350503.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 2 hits.
SM00300. ChSh. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O93480-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN
60 70 80 90 100
TWEPEENLDC PDLIAEFLQS QKTAHESEKS EGSKRKAESD TEDKGEESKP
110 120 130 140 150
KKKKEESEKP RGFARGFEPE RIIGATDSSG ELMFLMKWKN SDEADLVPAK
160 170 180
EANIKCPQVV ISFYEERLTW HSYPSEDDDK KEDKN
Length:185
Mass (Da):21,538
Last modified:November 1, 1998 - v1
Checksum:i4447596DC12A3EDC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03008627 Genomic DNA. No translation available.
AADN03008690 Genomic DNA. No translation available.
AB005617 mRNA. Translation: BAA33400.1.
RefSeqiNP_989663.1. NM_204332.1.
XP_015154963.1. XM_015299477.1.
XP_015154964.1. XM_015299478.1.
UniGeneiGga.25863.

Genome annotation databases

EnsembliENSGALT00000029894; ENSGALP00000029248; ENSGALG00000000230.
ENSGALT00000045933; ENSGALP00000040955; ENSGALG00000000230.
GeneIDi374237.
KEGGigga:374237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN03008627 Genomic DNA. No translation available.
AADN03008690 Genomic DNA. No translation available.
AB005617 mRNA. Translation: BAA33400.1.
RefSeqiNP_989663.1. NM_204332.1.
XP_015154963.1. XM_015299477.1.
XP_015154964.1. XM_015299478.1.
UniGeneiGga.25863.

3D structure databases

SMRiO93480. Positions 27-80, 104-176.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000000308.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000029894; ENSGALP00000029248; ENSGALG00000000230.
ENSGALT00000045933; ENSGALP00000040955; ENSGALG00000000230.
GeneIDi374237.
KEGGigga:374237.

Organism-specific databases

CTDi10951.

Phylogenomic databases

eggNOGiENOG410IUAA. Eukaryota.
ENOG4111H4A. LUCA.
GeneTreeiENSGT00510000046310.
HOGENOMiHOG000220852.
HOVERGENiHBG000400.
KOiK11585.
OMAiWKGTDDA.
OrthoDBiEOG091G0RBS.
PhylomeDBiO93480.
TreeFamiTF350503.

Gene expression databases

BgeeiENSGALG00000000230.

Family and domain databases

InterProiIPR000953. Chromo/shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
[Graphical view]
PfamiPF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
[Graphical view]
PRINTSiPR00504. CHROMODOMAIN.
SMARTiSM00298. CHROMO. 2 hits.
SM00300. ChSh. 1 hit.
[Graphical view]
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO93480_CHICK
AccessioniPrimary (citable) accession number: O93480
Secondary accession number(s): H9L191
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.