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Protein
Submitted name:

Stomatin

Gene

stom

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

ReactomeiR-DRE-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
StomatinImported
Gene namesi
Name:stomImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 21

Organism-specific databases

ZFINiZDB-GENE-980526-486. stom.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei34 – 56HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000003835.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 213PHBInterPro annotationAdd BLAST160

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2621. Eukaryota.
COG0330. LUCA.
GeneTreeiENSGT00550000074454.
HOGENOMiHOG000217040.
HOVERGENiHBG004815.
TreeFamiTF105750.

Family and domain databases

InterProiView protein in InterPro
IPR001107. Band_7.
IPR018080. Band_7/stomatin-like_CS.
IPR028515. Stomatin.
IPR001972. Stomatin_fam.
PANTHERiPTHR10264:SF105. PTHR10264:SF105. 1 hit.
PfamiView protein in Pfam
PF01145. Band_7. 1 hit.
PRINTSiPR00721. STOMATIN.
SMARTiView protein in SMART
SM00244. PHB. 1 hit.
SUPFAMiSSF117892. SSF117892. 1 hit.
PROSITEiView protein in PROSITE
PS01270. BAND_7. 1 hit.

Sequencei

Sequence statusi: Complete.

O93423-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDGRETAAM REEERRKRQI ALENTDSDIG LCGWILVIFS ILLTLLTLPL
60 70 80 90 100
SIWMCIKIVK EYERAIIFRL GRILRGGAKG PGLFFILPCT DSFINVDMRT
110 120 130 140 150
ITFDIPPQEV LTKDSVTVSV DGVVYYRVQN ATLAVANITN ADAATRLLAQ
160 170 180 190 200
TTLRNVLGTK NLAEILSDRE EIAHSMQSTL DDATDDWGIK VERVEIKDVK
210 220 230 240 250
LPLQLQRAMA AEAEASREAR AKVIAAEGEM NASRALKEAS LVIAESPSAL
260 270 280
QLRYLQTLNT IAAEKNSTII FPLPIDMMQS FLKH
Length:284
Mass (Da):31,605
Last modified:November 1, 1998 - v1
Checksum:iC1F7826314AA7DE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR762400 Genomic DNA. No translation available.
Y13473 mRNA. Translation: CAA73876.1.
RefSeqiNP_571833.1. NM_131758.2.
UniGeneiDr.75837.

Genome annotation databases

EnsembliENSDART00000005750; ENSDARP00000010282; ENSDARG00000003835.
GeneIDi81534.

Similar proteinsi

Entry informationi

Entry nameiO93423_DANRE
AccessioniPrimary (citable) accession number: O93423
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported