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Protein
Submitted name:

Homeobox transcription factor

Gene

Hoxd-11

Organism
Ambystoma mexicanum (Axolotl)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi204 – 263HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeobox transcription factorImported
Gene namesi
Name:Hoxd-11Imported
OrganismiAmbystoma mexicanum (Axolotl)Imported
Taxonomic identifieri8296 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaCaudataSalamandroideaAmbystomatidaeAmbystoma

Subcellular locationi

  • Nucleus PROSITE-ProRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO93287.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini202 – 262Homeobox DNA-bindingInterPro annotationAdd BLAST61

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

HOVERGENiHBG052048.

Family and domain databases

InterProiView protein in InterPro
IPR021918. DUF3528.
IPR009057. Homeobox-like.
IPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
PfamiView protein in Pfam
PF12045. DUF3528. 1 hit.
PF00046. Homeobox. 1 hit.
PRINTSiPR00024. HOMEOBOX.
SMARTiView protein in SMART
SM00389. HOX. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O93287-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEFDGCSNS ASNMYLPGCA YYVSPSDFSS KTSFLSQSSS CPMTFPYSSN
60 70 80 90 100
IPHVQPVREM AFREYGLERS KWQYRGSYSS YYPSEEVVHR DYIQPGNRRT
110 120 130 140 150
DVLFKSDPLC SHHGTPSASS NLYSTVGRNG VLPQEFDQFY EASQGNSYPP
160 170 180 190 200
ENGVPTEKTD SKNQPPKTAS PSPEKKVGAE GSTDSSSGEV TADKSNSSAT
210 220 230 240 250
PQRSRKKRCP YTKYQIRELE REFFFNVYIN KEKRLQLSRM LNLSDRQVKI
260 270
WFQNRRMREK KLNRDRLQYF TGNPLF
Length:276
Mass (Da):31,673
Last modified:November 1, 1998 - v1
Checksum:i5EC5DE03AF5B210F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF031481 mRNA. Translation: AAC34744.1.

Similar proteinsi

Entry informationi

Entry nameiO93287_AMBME
AccessioniPrimary (citable) accession number: O93287
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)