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Protein
Submitted name:

Gag polyprotein

Gene

gag

Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Gag polyproteinImported
Gene namesi
Name:gagImported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini348 – 362CCHC-typeInterPro annotationAdd BLAST15

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR032567. LDOC1-rel.
IPR005162. Retrotrans_gag_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PANTHERiPTHR15503. PTHR15503. 1 hit.
PfamiPF03732. Retrotrans_gag. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O93283-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQGGTPGQP GGPRTPTLPS PLERRVEAHS AQLSSLQSEL TKAFPTIQGE
60 70 80 90 100
ISELQSSSQT TSSTLSALSN QMSAMATVLA SIIQKLGSDP GGAAPSEPSL
110 120 130 140 150
PLSPRAEPNL ASPRVFGGDF DLGKGFLHQC ELLFRHQPSR FVSDEAKVGF
160 170 180 190 200
ITSLLADKAL SWAIAAVDLD PRLSSDYSAF RREFKAVFEH PTYGEDAASR
210 220 230 240 250
LLALQQGSRS VAEYTLEFRI LAAESRWGET ALRSAYRRGL SEAIKDLIVR
260 270 280 290 300
DRPSSLNELI TLSLQMDERL RERRQERAQR AGGSTRQLSH RTSSAPDFSL
310 320 330 340 350
TSTAAPPPHI LLQSPAHPSP RVGEEPMQIG RSRLSRQERE QRLRDQLCLY
360 370
CGNNGHFIQA CPVRPKGPAH Q
Length:371
Mass (Da):40,541
Last modified:November 1, 1998 - v1
Checksum:i617926FC010730AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF030881 Genomic DNA. Translation: AAC33525.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF030881 Genomic DNA. Translation: AAC33525.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR032567. LDOC1-rel.
IPR005162. Retrotrans_gag_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PANTHERiPTHR15503. PTHR15503. 1 hit.
PfamiPF03732. Retrotrans_gag. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
PROSITEiPS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO93283_TAKRU
AccessioniPrimary (citable) accession number: O93283
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.