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O92452 (O92452_NPVBM) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names

Orf92 EMBL AGX01302.1

P33 EMBL AFN09005.1
Gene names
Name:Orf_75 EMBL AAC63761.1
ORF Names:bmnpvc2gp074 EMBL AGX01302.1, Bmnpvcubicgp078 EMBL AFN09005.1, Bmnpvguangxigp078 EMBL AFN21330.1, Bmnpvindiagp077 EMBL AFN21191.1, Bmnpvzhejianggp078 EMBL AFN21051.1
OrganismBombyx mori nuclear polyhedrosis virus (BmNPV) EMBL AAC63761.1
Taxonomic identifier271108 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageBaculoviridaeAlphabaculovirus
Virus hostBombyx mori (Silk moth) [TaxID: 7091]

Protein attributes

Sequence length259 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   LigandFAD PDB 3UST
Flavoprotein
Nucleotide-binding PDB 3UST
   Technical term3D-structure PDB 3UST
Gene Ontology (GO)
   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding222 – 23514FAD PDB 3UST

Sites

Binding site1101FAD PDB 3UST
Binding site1611FAD PDB 3UST

Sequences

Sequence LengthMass (Da)Tools
O92452 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 8F8C3E08E9F0127F

FASTA25930,863
        10         20         30         40         50         60 
MIPLTPLFSR YKDSYLLYSF RLIDLLRASK SAHLTKLLSS QATYLYHFAC LMKYKDIQKY 

        70         80         90        100        110        120 
EVQQLIEWAI NASPDMDLQQ FRIEFMDKTT ELNLRSCQPK SFTYTFTTIW DTMHFLSLII 

       130        140        150        160        170        180 
DDMVYTRDKS SLDFVMQQLK TMKVLFYNVF FILQCAMCRD HYMNVKGFLI YHIELIEIAL 

       190        200        210        220        230        240 
DKEKYGTDIT FVDSYQQETA GADAAAVSNN MLMKNLMAYV IMTFHNHVND YKWIQRNQKP 

       250 
PAHYERMTWG EYKKLLNLQ 

« Hide

References

[1]"Sequencing of the putative DNA helicase-encoding gene of the Bombyx mori nuclear polyhedrosis virus and fine-mapping of a region involved in host range expansion."
Kamita S.G., Maeda S.
Gene 190:173-179(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T3 EMBL AAC63761.1.
[2]Gomi S.
Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T3 EMBL AAC63761.1.
[3]"Sequence analysis of the genome of Bombyx mori nucleopolyhedrovirus."
Gomi S., Majima K., Maeda S.
J. Gen. Virol. 80:1323-1337(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: T3 EMBL AAC63761.1.
[4]"Crystal structure of Bombyx mori nucleopolyhedrovirus ORF75 reveals a pseudo-dimer of thiol oxidase domains with a putative substrate-binding pocket."
Hou Y., Xia Q., Yuan Y.A.
J. Gen. Virol. 93:2142-2151(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) IN COMPLEX WITH FAD.
[5]"Genome sequence of a Bombyx mori nucleopolyhedrovirus strain with cubic occlusion bodies."
Cheng R.L., Xu Y.P., Zhang C.X.
J. Virol. 86:10245-10245(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Cubic EMBL AFN09005.1.
[6]"Genome of a Bombyx mori Nucleopolyhedrovirus Strain Isolated from India."
Fan H.W., Zhang X.C., Xu Y.P., Cheng X.W., Zhang C.X.
J. Virol. 86:11941-11941(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: India EMBL AFN21191.1.
[7]Zhang C.-X.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Guangxi EMBL AFN21330.1.
[8]Zhang C.-X., Xu Y.-P.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: India EMBL AFN21191.1 and Zhejiang EMBL AFN21051.1.
[9]Xu Y.-P., Wang W.-B., Zhang C.-X.
Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Cubic EMBL AFN09005.1.
[10]"Genomic diversity of Bombyx mori nucleopolyhedrovirus strains."
Xu Y.P., Cheng R.L., Xi Y., Zhang C.X.
Genomics 102:63-71(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Cubic EMBL AFN09005.1, Guangxi EMBL AFN21330.1, India EMBL AFN21191.1 and Zhejiang EMBL AFN21051.1.
[11]Choi J.H., Kim M., Kang J.I.
Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C2 EMBL AGX01302.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L33180 Genomic DNA. Translation: AAC63761.1.
JQ991009 Genomic DNA. Translation: AFN09005.1.
JQ991008 Genomic DNA. Translation: AFN21051.1.
JQ991010 Genomic DNA. Translation: AFN21191.1.
JQ991011 Genomic DNA. Translation: AFN21330.1.
KF306216 Genomic DNA. Translation: AGX01302.1.
PIRT41832.
RefSeqNP_047492.1. NC_001962.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3USTX-ray2.10A1-259[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1488707.

Phylogenomic databases

ProtClustDBCLSP2509954.

Family and domain databases

InterProIPR007879. Baculo_p33.
[Graphical view]
PfamPF05214. Baculo_p33. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO92452_NPVBM
AccessionPrimary (citable) accession number: O92452
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 19, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)