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O90754

- O90754_9PICO

UniProt

O90754 - O90754_9PICO

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Protein
Submitted name: Capsid
Gene
N/A
Organism
Foot-and-mouth disease virus
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural molecule activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
CapsidImported
OrganismiFoot-and-mouth disease virusImported
Taxonomic identifieri12110 [NCBI]
Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeAphthovirus

Subcellular locationi

GO - Cellular componenti

  1. icosahedral viral capsid Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

Capsid proteinSAAS annotations, Virion

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1BBTX-ray2.6041-85[»]
ProteinModelPortaliO90754.

Miscellaneous databases

EvolutionaryTraceiO90754.

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProiIPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view]
PfamiPF00073. Rhv. 2 hits.
PF08935. VP4_2. 1 hit.
[Graphical view]
PRINTSiPR01542. FMDVP1COAT.

Sequencei

Sequence statusi: Fragment.

O90754-1 [UniParc]FASTAAdd to Basket

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GAGQSSPATG SQNQSGNTGS IINNYYMQQY QNSMDTQLGD NAISGGSNEG    50
STDTTSTHTN NTQNNDWFSK LAQSAFSGLV GALLADKKTE ETTLLEDRIV 100
TTSHGTTTST TQSSVGVTYG YALTDKFLPG PNTNGLETRV EQAERFFKHK 150
LFDWTLDQQF GTTYVLELPT DHKGIYGQLV DSHAYIRNGW DVQVSATATQ 200
FNGGCLLVAM VPELCKLDDR EKYQLTLFPH QFLNPRTNTT AHIQVPYLGV 250
DRHDQGTRHK AWTLVVMVLA PYTNDQTIGS TKAEVYVNIA PTNVYVAGEK 300
PVKQGILPVA VSDGYGGFQN TDPKTSDPVY GHVYNPGRTL YPGRFTNLLD 350
VAEACPTLLD FNGVPYVQTQ SNSGSKVLAC FDLAFGHKNM KNTYMSGLAQ 400
YFAQYSGTLN LHFMYTGPTN NKAKYMVAYI PPGTHPLPET PEMASHCYHA 450
EWDTGLNSTF TFTVPYFSAA DYAYTYADEP EQASVQGWVG VYQITDTHEK 500
DGAVIVTVSA GPDFEFRMPI SPSRQTTSAG EGADPVTTDA SAHGGDTRTT 550
RRAHTDVTFL LDRFTLVGKT NDNKLVLDLL STKEKSLVGA LLRAATYYFS 600
DLEVACVGTN AWVGWTPNGS PVLTEVGDNQ VVFSRRGTTR FALPYTAPHR 650
VLATVYNGDC KYKPTGTAPR ENIRGDLATL AARIASETHI PTTFNYGMIY 700
TQAEVDVYLR MKRAELYCPR PVLTHYDHNG RDRYKTTLVK PAKQLS 746
Length:746
Mass (Da):81,990
Last modified:November 1, 1998 - v1
Checksum:iF4E5D8C13FC8EC86
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei746 – 7461Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z98203 Genomic RNA. Translation: CAB10893.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z98203 Genomic RNA. Translation: CAB10893.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1BBT X-ray 2.60 4 1-85 [» ]
ProteinModelPortali O90754.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei O90754.

Family and domain databases

Gene3Di 2.60.120.20. 3 hits.
4.10.90.10. 1 hit.
InterProi IPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR029053. Viral_coat.
[Graphical view ]
Pfami PF00073. Rhv. 2 hits.
PF08935. VP4_2. 1 hit.
[Graphical view ]
PRINTSi PR01542. FMDVP1COAT.
ProtoNeti Search...

Publicationsi

  1. "Methods used in the structure determination of foot-and-mouth disease virus."
    Fry E., Acharya R., Stuart D.
    Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 1-85.
  2. "Nucleotide sequence of the capsid-coding region of foot-and-mouth disease virus type SAT 1."
    Knowles N.J., Ansell D.M., Samuel A.R.
    Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BOT/1/68Imported.

Entry informationi

Entry nameiO90754_9PICO
AccessioniPrimary (citable) accession number: O90754
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: July 9, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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