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O90754

- O90754_9PICO

UniProt

O90754 - O90754_9PICO

Protein
Submitted name:

Capsid

Gene
N/A
Organism
Foot-and-mouth disease virus
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (01 Nov 1998)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural molecule activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    CapsidImported
    OrganismiFoot-and-mouth disease virusImported
    Taxonomic identifieri12110 [NCBI]
    Taxonomic lineageiVirusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeAphthovirus

    Subcellular locationi

    GO - Cellular componenti

    1. icosahedral viral capsid Source: InterPro

    Keywords - Cellular componenti

    Capsid proteinSAAS annotation, Virion

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1BBTX-ray2.6041-85[»]
    ProteinModelPortaliO90754.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiO90754.

    Family & Domainsi

    Family and domain databases

    Gene3Di2.60.120.20. 3 hits.
    4.10.90.10. 1 hit.
    InterProiIPR015031. Capsid_VP4_Picornavir.
    IPR004080. FMDV_VP1_coat.
    IPR001676. Picornavirus_capsid.
    IPR029053. Viral_coat.
    [Graphical view]
    PfamiPF00073. Rhv. 2 hits.
    PF08935. VP4_2. 1 hit.
    [Graphical view]
    PRINTSiPR01542. FMDVP1COAT.

    Sequencei

    Sequence statusi: Fragment.

    O90754-1 [UniParc]FASTAAdd to Basket

    « Hide

    GAGQSSPATG SQNQSGNTGS IINNYYMQQY QNSMDTQLGD NAISGGSNEG    50
    STDTTSTHTN NTQNNDWFSK LAQSAFSGLV GALLADKKTE ETTLLEDRIV 100
    TTSHGTTTST TQSSVGVTYG YALTDKFLPG PNTNGLETRV EQAERFFKHK 150
    LFDWTLDQQF GTTYVLELPT DHKGIYGQLV DSHAYIRNGW DVQVSATATQ 200
    FNGGCLLVAM VPELCKLDDR EKYQLTLFPH QFLNPRTNTT AHIQVPYLGV 250
    DRHDQGTRHK AWTLVVMVLA PYTNDQTIGS TKAEVYVNIA PTNVYVAGEK 300
    PVKQGILPVA VSDGYGGFQN TDPKTSDPVY GHVYNPGRTL YPGRFTNLLD 350
    VAEACPTLLD FNGVPYVQTQ SNSGSKVLAC FDLAFGHKNM KNTYMSGLAQ 400
    YFAQYSGTLN LHFMYTGPTN NKAKYMVAYI PPGTHPLPET PEMASHCYHA 450
    EWDTGLNSTF TFTVPYFSAA DYAYTYADEP EQASVQGWVG VYQITDTHEK 500
    DGAVIVTVSA GPDFEFRMPI SPSRQTTSAG EGADPVTTDA SAHGGDTRTT 550
    RRAHTDVTFL LDRFTLVGKT NDNKLVLDLL STKEKSLVGA LLRAATYYFS 600
    DLEVACVGTN AWVGWTPNGS PVLTEVGDNQ VVFSRRGTTR FALPYTAPHR 650
    VLATVYNGDC KYKPTGTAPR ENIRGDLATL AARIASETHI PTTFNYGMIY 700
    TQAEVDVYLR MKRAELYCPR PVLTHYDHNG RDRYKTTLVK PAKQLS 746
    Length:746
    Mass (Da):81,990
    Last modified:November 1, 1998 - v1
    Checksum:iF4E5D8C13FC8EC86
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei746 – 7461Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z98203 Genomic RNA. Translation: CAB10893.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z98203 Genomic RNA. Translation: CAB10893.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1BBT X-ray 2.60 4 1-85 [» ]
    ProteinModelPortali O90754.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei O90754.

    Family and domain databases

    Gene3Di 2.60.120.20. 3 hits.
    4.10.90.10. 1 hit.
    InterProi IPR015031. Capsid_VP4_Picornavir.
    IPR004080. FMDV_VP1_coat.
    IPR001676. Picornavirus_capsid.
    IPR029053. Viral_coat.
    [Graphical view ]
    Pfami PF00073. Rhv. 2 hits.
    PF08935. VP4_2. 1 hit.
    [Graphical view ]
    PRINTSi PR01542. FMDVP1COAT.
    ProtoNeti Search...

    Publicationsi

    1. "Methods used in the structure determination of foot-and-mouth disease virus."
      Fry E., Acharya R., Stuart D.
      Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 1-85.
    2. "Nucleotide sequence of the capsid-coding region of foot-and-mouth disease virus type SAT 1."
      Knowles N.J., Ansell D.M., Samuel A.R.
      Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BOT/1/68Imported.

    Entry informationi

    Entry nameiO90754_9PICO
    AccessioniPrimary (citable) accession number: O90754
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1998
    Last sequence update: November 1, 1998
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3