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Protein
Submitted name:

Capsid

Gene
N/A
Organism
Foot-and-mouth disease virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
CapsidImported
OrganismiFoot-and-mouth disease virusImported
Taxonomic identifieri12110 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeAphthovirus

Subcellular locationi

  • Virion SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

Capsid proteinSAAS annotation, Virion

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1BBTX-ray2.6041-85[»]
ProteinModelPortaliO90754.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO90754.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 84VP4_2InterPro annotationAdd BLAST84
Domaini110 – 273RhvInterPro annotationAdd BLAST164
Domaini369 – 489RhvInterPro annotationAdd BLAST121
Domaini523 – 667RhvInterPro annotationAdd BLAST145

Family and domain databases

CDDicd00205. rhv_like. 3 hits.
Gene3Di4.10.90.10. 1 hit.
InterProiView protein in InterPro
IPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
IPR033703. Rhv-like.
PfamiView protein in Pfam
PF00073. Rhv. 3 hits.
PF08935. VP4_2. 1 hit.
PRINTSiPR01542. FMDVP1COAT.

Sequencei

Sequence statusi: Fragment.

O90754-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GAGQSSPATG SQNQSGNTGS IINNYYMQQY QNSMDTQLGD NAISGGSNEG
60 70 80 90 100
STDTTSTHTN NTQNNDWFSK LAQSAFSGLV GALLADKKTE ETTLLEDRIV
110 120 130 140 150
TTSHGTTTST TQSSVGVTYG YALTDKFLPG PNTNGLETRV EQAERFFKHK
160 170 180 190 200
LFDWTLDQQF GTTYVLELPT DHKGIYGQLV DSHAYIRNGW DVQVSATATQ
210 220 230 240 250
FNGGCLLVAM VPELCKLDDR EKYQLTLFPH QFLNPRTNTT AHIQVPYLGV
260 270 280 290 300
DRHDQGTRHK AWTLVVMVLA PYTNDQTIGS TKAEVYVNIA PTNVYVAGEK
310 320 330 340 350
PVKQGILPVA VSDGYGGFQN TDPKTSDPVY GHVYNPGRTL YPGRFTNLLD
360 370 380 390 400
VAEACPTLLD FNGVPYVQTQ SNSGSKVLAC FDLAFGHKNM KNTYMSGLAQ
410 420 430 440 450
YFAQYSGTLN LHFMYTGPTN NKAKYMVAYI PPGTHPLPET PEMASHCYHA
460 470 480 490 500
EWDTGLNSTF TFTVPYFSAA DYAYTYADEP EQASVQGWVG VYQITDTHEK
510 520 530 540 550
DGAVIVTVSA GPDFEFRMPI SPSRQTTSAG EGADPVTTDA SAHGGDTRTT
560 570 580 590 600
RRAHTDVTFL LDRFTLVGKT NDNKLVLDLL STKEKSLVGA LLRAATYYFS
610 620 630 640 650
DLEVACVGTN AWVGWTPNGS PVLTEVGDNQ VVFSRRGTTR FALPYTAPHR
660 670 680 690 700
VLATVYNGDC KYKPTGTAPR ENIRGDLATL AARIASETHI PTTFNYGMIY
710 720 730 740
TQAEVDVYLR MKRAELYCPR PVLTHYDHNG RDRYKTTLVK PAKQLS
Length:746
Mass (Da):81,990
Last modified:November 1, 1998 - v1
Checksum:iF4E5D8C13FC8EC86
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei746Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z98203 Genomic RNA. Translation: CAB10893.1.

Similar proteinsi

Entry informationi

Entry nameiO90754_9PICO
AccessioniPrimary (citable) accession number: O90754
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources