O90754 (O90754_9PICO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Capsid EMBL CAB10893.1
Organism	Foot-and-mouth disease virus EMBL CAB10893.1
Taxonomic identifier	12110 [NCBI]
Taxonomic lineage	Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Picornavirales › Picornaviridae › Aphthovirus

Protein attributes

Sequence length	746 AA.
Sequence status	Fragment.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 1BBT
Gene Ontology (GO)
Cellular_component	icosahedral viral capsid Inferred from electronic annotation. Source: InterPro
Molecular_function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAB10893.1
	Non-terminal residue	746	1	EMBL CAB10893.1

Sequences

	Sequence		Length	Mass (Da)
	O90754 [UniParc]. Last modified November 1, 1998. Version 1. Checksum: F4E5D8C13FC8EC86	FASTA	746	81,990
	10 20 30 40 50 60 GAGQSSPATG SQNQSGNTGS IINNYYMQQY QNSMDTQLGD NAISGGSNEG STDTTSTHTN 70 80 90 100 110 120 NTQNNDWFSK LAQSAFSGLV GALLADKKTE ETTLLEDRIV TTSHGTTTST TQSSVGVTYG 130 140 150 160 170 180 YALTDKFLPG PNTNGLETRV EQAERFFKHK LFDWTLDQQF GTTYVLELPT DHKGIYGQLV 190 200 210 220 230 240 DSHAYIRNGW DVQVSATATQ FNGGCLLVAM VPELCKLDDR EKYQLTLFPH QFLNPRTNTT 250 260 270 280 290 300 AHIQVPYLGV DRHDQGTRHK AWTLVVMVLA PYTNDQTIGS TKAEVYVNIA PTNVYVAGEK 310 320 330 340 350 360 PVKQGILPVA VSDGYGGFQN TDPKTSDPVY GHVYNPGRTL YPGRFTNLLD VAEACPTLLD 370 380 390 400 410 420 FNGVPYVQTQ SNSGSKVLAC FDLAFGHKNM KNTYMSGLAQ YFAQYSGTLN LHFMYTGPTN 430 440 450 460 470 480 NKAKYMVAYI PPGTHPLPET PEMASHCYHA EWDTGLNSTF TFTVPYFSAA DYAYTYADEP 490 500 510 520 530 540 EQASVQGWVG VYQITDTHEK DGAVIVTVSA GPDFEFRMPI SPSRQTTSAG EGADPVTTDA 550 560 570 580 590 600 SAHGGDTRTT RRAHTDVTFL LDRFTLVGKT NDNKLVLDLL STKEKSLVGA LLRAATYYFS 610 620 630 640 650 660 DLEVACVGTN AWVGWTPNGS PVLTEVGDNQ VVFSRRGTTR FALPYTAPHR VLATVYNGDC 670 680 690 700 710 720 KYKPTGTAPR ENIRGDLATL AARIASETHI PTTFNYGMIY TQAEVDVYLR MKRAELYCPR 730 740 PVLTHYDHNG RDRYKTTLVK PAKQLS

References

[1]	"Methods used in the structure determination of foot-and-mouth disease virus." Fry E., Acharya R., Stuart D. Acta Crystallogr. A 49 ( Pt 1):45-55(1993) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 1-85.
[2]	"Nucleotide sequence of the capsid-coding region of foot-and-mouth disease virus type SAT 1." Knowles N.J., Ansell D.M., Samuel A.R. Submitted (JUL-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BOT/1/68 EMBL CAB10893.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Z98203 Genomic RNA. Translation: CAB10893.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1BBT	X-ray	2.60	4	1-85	[»]

ProteinModelPortal

O90754.

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

Gene3D

4.10.90.10. 1 hit.

InterPro

IPR015031. Capsid_VP4_Picornavir.
IPR004080. FMDV_VP1_coat.
IPR001676. Picornavirus_capsid.
[Graphical view]

Pfam

PF00073. Rhv. 2 hits.
PF08935. VP4_2. 1 hit.
[Graphical view]

PRINTS

PR01542. FMDVP1COAT.

ProtoNet

Search...

Other

EvolutionaryTrace

O90754.

Entry information

Entry name

O90754_9PICO

Accession

Primary (citable) accession number: O90754

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1998
Last sequence update:	November 1, 1998
Last modified:	April 3, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)