Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Vpr protein

Gene

vpr

Organism
Human immunodeficiency virus 1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Host-virus interactionSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Vpr proteinImported
Gene namesi
Name:vprImported
OrganismiHuman immunodeficiency virus 1Imported
Taxonomic identifieri11676 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Subcellular locationi

  • Host nucleus SAAS annotation
  • Virion SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusSAAS annotation, VirionSAAS annotation

Pathology & Biotechi

Keywords - Diseasei

AIDSSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliO89928.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

InterProiIPR000012. RetroV_VpR/X.
[Graphical view]
PfamiPF00522. VPR. 1 hit.
[Graphical view]
PRINTSiPR00444. HIVVPRVPX.

Sequencei

Sequence statusi: Complete.

O89928-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQVPEDQGP QREPYNEWAL ELLEGLKNEA VRHFPRPWLH GLGQHIYNTY
60 70 80 90
GDTWEGVEAI IRILQQLLFI HFRIGCQHSR IGITLRRRVR NGPSRS
Length:96
Mass (Da):11,327
Last modified:November 1, 1998 - v1
Checksum:i4873E762DF679C3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF061640 Genomic DNA. Translation: AAC29046.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF061640 Genomic DNA. Translation: AAC29046.1.

3D structure databases

ProteinModelPortaliO89928.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR000012. RetroV_VpR/X.
[Graphical view]
PfamiPF00522. VPR. 1 hit.
[Graphical view]
PRINTSiPR00444. HIVVPRVPX.
ProtoNetiSearch...

Publicationsi

  1. "Rapid and simple characterization of in vivo HIV-1 sequences using solid-phase direct sequencing."
    Salminen M.
    AIDS Res. Hum. Retroviruses 8:1733-1742(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HH8793Imported.
  2. "Molecular epidemiology of HIV-1 based on phylogenetic analysis of in vivo gag p7/p9 direct sequences."
    Salminen M., Nykanen A., Brummer-Korvenkontio H., Kantanen M.L., Liitsola K., Leinikki P.
    Virology 195:185-194(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HH8793Imported.
  3. "Full genome sequences of human immunodeficiency virus type 1 subtypes G and A/G intersubtype recombinants."
    Carr J.K., Salminen M.O., Albert J., Sanders-Buell E., Gotte D., Birx D.L., McCutchan F.E.
    Virology 247:22-31(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HH8793Imported.

Entry informationi

Entry nameiO89928_9HIV1
AccessioniPrimary (citable) accession number: O89928
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: June 8, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.