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Protein

Protein Tat

Gene

tat

Organism
Equine infectious anemia virus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

RNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TatUniRule annotation
Gene namesi
Name:tatImported
OrganismiEquine infectious anemia virusImported
Taxonomic identifieri11665 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusEquine lentivirus group

Subcellular locationi

  • Host nucleushost nucleolus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi40 ↔ 43Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TVSNMR-A6-78[»]
1TVTNMR-A6-78[»]
SMRiO89467. Positions 4-78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lentiviruses Tat family.UniRule annotation

Family and domain databases

InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O89467-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNLADRRIP GTAEENLQKS SGGVPGQNTG GQEARPNYHC QLCFLRSLGI
60 70
DYLDASLRKK NKQRLKAIQQ GRQPQYLL
Length:78
Mass (Da):8,754
Last modified:November 1, 1998 - v1
Checksum:i22E8CFE79CA9F946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028231 Genomic DNA. Translation: AAC24016.1.
AF247394 mRNA. Translation: AAG02703.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028231 Genomic DNA. Translation: AAC24016.1.
AF247394 mRNA. Translation: AAG02703.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TVSNMR-A6-78[»]
1TVTNMR-A6-78[»]
SMRiO89467. Positions 4-78.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO89467_9RETR
AccessioniPrimary (citable) accession number: O89467
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.