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Protein

Protein Tat

Gene

tat

Organism
Equine infectious anemia virus
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

RNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TatUniRule annotation
Gene namesi
Name:tatImported
OrganismiEquine infectious anemia virusImported
Taxonomic identifieri11665 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusEquine lentivirus group

Subcellular locationi

  • Host nucleushost nucleolus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi40 ↔ 43Combined sources

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TVSNMR-A6-78[»]
1TVTNMR-A6-78[»]
SMRiO89467. Positions 4-78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lentiviruses Tat family.UniRule annotation

Family and domain databases

InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O89467-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNLADRRIP GTAEENLQKS SGGVPGQNTG GQEARPNYHC QLCFLRSLGI
60 70
DYLDASLRKK NKQRLKAIQQ GRQPQYLL
Length:78
Mass (Da):8,754
Last modified:November 1, 1998 - v1
Checksum:i22E8CFE79CA9F946
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028231 Genomic DNA. Translation: AAC24016.1.
AF247394 mRNA. Translation: AAG02703.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF028231 Genomic DNA. Translation: AAC24016.1.
AF247394 mRNA. Translation: AAG02703.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1TVSNMR-A6-78[»]
1TVTNMR-A6-78[»]
SMRiO89467. Positions 4-78.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Trifluoroethanol stabilizes a helix-turn-helix motif in equine infectious-anemia-virus trans-activator protein."
    Sticht H., Willbold D., Ejchart A., Rosin-Arbesfeld R., Yaniv A., Gazit A., Rosch P.
    Eur. J. Biochem. 225:855-861(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 6-78, DISULFIDE BONDS.
  2. "Structure of the equine infectious anemia virus Tat protein."
    Willbold D., Rosin-Arbesfeld R., Sticht H., Frank R., Rosch P.
    Science 264:1584-1587(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 6-78, DISULFIDE BONDS.
  3. "Disease Induction by Virus Derived from Molecular Clones of Equine Infectious Anemia Virus."
    Payne S.L., Qi X.-M., Shao H., Dwyer A., Fuller F.J.
    Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  4. "Equine infectious anaemia virus proteins with epitopes most frequently recognized by cytotoxic T lymphocytes from infected horses."
    McGuire T.C., Leib S.R., Lonning S.M., Zhang W., Byrne K.M., Mealey R.H.
    J. Gen. Virol. 81:2735-2739(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO89467_9RETR
AccessioniPrimary (citable) accession number: O89467
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 13, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.