Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

High mobility group AT-hook 2

Gene

Hmga2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group AT-hook 2Imported
Submitted name:
Non-histone chromosomal architectural protein HMGI-CImported
Submitted name:
Protein Hmga2Imported
Gene namesi
Name:Hmga2Imported
ORF Names:rCG_49178Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi620617. Hmga2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

PTM databases

PhosphoSitePlusiO88791.

Expressioni

Gene expression databases

BgeeiENSRNOG00000042460.

Interactioni

GO - Molecular functioni

  • C2H2 zinc finger domain binding Source: UniProtKB
  • enzyme binding Source: RGD
  • MH1 domain binding Source: UniProtKB
  • MH2 domain binding Source: UniProtKB

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061041.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
GeneTreeiENSGT00730000111387.
HOVERGENiHBG051913.
KOiK09283.
OMAiNKGPKTA.
OrthoDBiEOG091G17KT.
PhylomeDBiO88791.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PfamiPF02178. AT_hook. 3 hits.
[Graphical view]
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88791-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARGEGAGQ PSTSAQGQPA TPAPQKRGRG RPRKQPQEPT CEPSPKRPRG
60 70 80 90 100
RPKGSKNKSP SKAAQKKAET IGEKRPRGRP RKWPQQIVQK PAQETEETSS

QESAEED
Length:107
Mass (Da):11,676
Last modified:November 1, 1998 - v1
Checksum:iFEEEAFFF56F6B643
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057302 Genomic DNA. No translation available.
U89695 mRNA. Translation: AAC25950.1.
CH473960 Genomic DNA. Translation: EDM16566.1.
RefSeqiNP_114459.1. NM_032070.1.
UniGeneiRn.29981.

Genome annotation databases

EnsembliENSRNOT00000065137; ENSRNOP00000061041; ENSRNOG00000042460.
GeneIDi84017.
KEGGirno:84017.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057302 Genomic DNA. No translation available.
U89695 mRNA. Translation: AAC25950.1.
CH473960 Genomic DNA. Translation: EDM16566.1.
RefSeqiNP_114459.1. NM_032070.1.
UniGeneiRn.29981.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061041.

PTM databases

PhosphoSitePlusiO88791.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000065137; ENSRNOP00000061041; ENSRNOG00000042460.
GeneIDi84017.
KEGGirno:84017.

Organism-specific databases

CTDi8091.
RGDi620617. Hmga2.

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
GeneTreeiENSGT00730000111387.
HOVERGENiHBG051913.
KOiK09283.
OMAiNKGPKTA.
OrthoDBiEOG091G17KT.
PhylomeDBiO88791.

Gene expression databases

BgeeiENSRNOG00000042460.

Family and domain databases

InterProiIPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
[Graphical view]
PfamiPF02178. AT_hook. 3 hits.
[Graphical view]
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiSM00384. AT_hook. 3 hits.
[Graphical view]
PROSITEiPS00354. HMGI_Y. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO88791_RAT
AccessioniPrimary (citable) accession number: O88791
Secondary accession number(s): F1M940
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 2, 2016
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.