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Protein
Submitted name:

High mobility group AT-hook 2

Gene

Hmga2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group AT-hook 2Imported
Submitted name:
Non-histone chromosomal architectural protein HMGI-CImported
Gene namesi
Name:Hmga2Imported
ORF Names:rCG_49178Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi620617 Hmga2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000042460

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061041

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IZGR Eukaryota
ENOG410YWK3 LUCA
GeneTreeiENSGT00730000111387
HOVERGENiHBG051913
KOiK09283
OMAiPRKWPRK
OrthoDBiEOG091G17KT

Family and domain databases

InterProiView protein in InterPro
IPR017956 AT_hook_DNA-bd_motif
IPR000116 HMGA
IPR000637 HMGI/Y_DNA-bd_CS
PfamiView protein in Pfam
PF02178 AT_hook, 3 hits
PRINTSiPR00929 ATHOOK
PR00930 HIGHMOBLTYIY
SMARTiView protein in SMART
SM00384 AT_hook, 3 hits
PROSITEiView protein in PROSITE
PS00354 HMGI_Y, 1 hit

Sequencei

Sequence statusi: Complete.

O88791-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARGEGAGQ PSTSAQGQPA TPAPQKRGRG RPRKQPQEPT CEPSPKRPRG
60 70 80 90 100
RPKGSKNKSP SKAAQKKAET IGEKRPRGRP RKWPQQIVQK PAQETEETSS

QESAEED
Length:107
Mass (Da):11,676
Last modified:November 1, 1998 - v1
Checksum:iFEEEAFFF56F6B643
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057302 Genomic DNA No translation available.
U89695 mRNA Translation: AAC25950.1
CH473960 Genomic DNA Translation: EDM16566.1
RefSeqiNP_114459.1, NM_032070.1
UniGeneiRn.29981

Genome annotation databases

EnsembliENSRNOT00000065137; ENSRNOP00000061041; ENSRNOG00000042460
GeneIDi84017
KEGGirno:84017

Similar proteinsi

Entry informationi

Entry nameiO88791_RAT
AccessioniPrimary (citable) accession number: O88791
Secondary accession number(s): F1M940
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 28, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health