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Protein
Submitted name:

High mobility group AT-hook 2

Gene

Hmga2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
High mobility group AT-hook 2Imported
Submitted name:
Non-histone chromosomal architectural protein HMGI-CImported
Submitted name:
Protein Hmga2Imported
Gene namesi
Name:Hmga2Imported
ORF Names:rCG_49178Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi620617. Hmga2.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

PTM databases

PhosphoSitePlusiO88791.

Expressioni

Gene expression databases

BgeeiENSRNOG00000042460.

Interactioni

GO - Molecular functioni

  • C2H2 zinc finger domain binding Source: UniProtKB
  • enzyme binding Source: RGD
  • MH1 domain binding Source: UniProtKB
  • MH2 domain binding Source: UniProtKB

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061041.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
GeneTreeiENSGT00730000111387.
HOVERGENiHBG051913.
KOiK09283.
OMAiNKGPKTA.
OrthoDBiEOG091G17KT.
PhylomeDBiO88791.

Family and domain databases

InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
PfamiView protein in Pfam
PF02178. AT_hook. 3 hits.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
PROSITEiView protein in PROSITE
PS00354. HMGI_Y. 1 hit.

Sequencei

Sequence statusi: Complete.

O88791-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSARGEGAGQ PSTSAQGQPA TPAPQKRGRG RPRKQPQEPT CEPSPKRPRG
60 70 80 90 100
RPKGSKNKSP SKAAQKKAET IGEKRPRGRP RKWPQQIVQK PAQETEETSS

QESAEED
Length:107
Mass (Da):11,676
Last modified:November 1, 1998 - v1
Checksum:iFEEEAFFF56F6B643
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057302 Genomic DNA. No translation available.
U89695 mRNA. Translation: AAC25950.1.
CH473960 Genomic DNA. Translation: EDM16566.1.
RefSeqiNP_114459.1. NM_032070.1.
UniGeneiRn.29981.

Genome annotation databases

EnsembliENSRNOT00000065137; ENSRNOP00000061041; ENSRNOG00000042460.
GeneIDi84017.
KEGGirno:84017.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07057302 Genomic DNA. No translation available.
U89695 mRNA. Translation: AAC25950.1.
CH473960 Genomic DNA. Translation: EDM16566.1.
RefSeqiNP_114459.1. NM_032070.1.
UniGeneiRn.29981.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000061041.

PTM databases

PhosphoSitePlusiO88791.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000065137; ENSRNOP00000061041; ENSRNOG00000042460.
GeneIDi84017.
KEGGirno:84017.

Organism-specific databases

CTDi8091.
RGDi620617. Hmga2.

Phylogenomic databases

eggNOGiENOG410IZGR. Eukaryota.
ENOG410YWK3. LUCA.
GeneTreeiENSGT00730000111387.
HOVERGENiHBG051913.
KOiK09283.
OMAiNKGPKTA.
OrthoDBiEOG091G17KT.
PhylomeDBiO88791.

Gene expression databases

BgeeiENSRNOG00000042460.

Family and domain databases

InterProiView protein in InterPro
IPR017956. AT_hook_DNA-bd_motif.
IPR000116. HMGA.
IPR000637. HMGI/Y_DNA-bd_CS.
PfamiView protein in Pfam
PF02178. AT_hook. 3 hits.
PRINTSiPR00929. ATHOOK.
PR00930. HIGHMOBLTYIY.
SMARTiView protein in SMART
SM00384. AT_hook. 3 hits.
PROSITEiView protein in PROSITE
PS00354. HMGI_Y. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO88791_RAT
AccessioniPrimary (citable) accession number: O88791
Secondary accession number(s): F1M940
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: February 15, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.