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O88684 (O88684_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Bmp7 RGD 620743
OrganismRattus norvegicus (Rat) EMBL BAA31853.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length141 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the TGF-beta family. RuleBase RU000354

Ontologies

Keywords
   Cellular componentSecreted SAAS SAAS001839
   Molecular functionGrowth factor RuleBase RU000354 SAAS SAAS001839
   PTMDisulfide bond SAAS SAAS001839
Gene Ontology (GO)
   Biological_processBMP signaling pathway

Inferred from electronic annotation. Source: Compara

SMAD protein signal transduction

Inferred from electronic annotation. Source: Compara

axon guidance

Inferred from electronic annotation. Source: Compara

branching involved in salivary gland morphogenesis

Inferred from electronic annotation. Source: Compara

branching morphogenesis of an epithelial tube

Inferred from electronic annotation. Source: Compara

embryonic camera-type eye morphogenesis

Inferred from electronic annotation. Source: Compara

embryonic limb morphogenesis

Inferred from electronic annotation. Source: Compara

embryonic pattern specification

Inferred from electronic annotation. Source: Compara

embryonic skeletal joint morphogenesis

Inferred from electronic annotation. Source: Compara

epithelial cell differentiation

Inferred from electronic annotation. Source: Compara

mesenchymal cell differentiation

Inferred from electronic annotation. Source: Compara

mesenchyme development

Inferred from sequence or structural similarity. Source: UniProtKB

mesoderm formation

Inferred from electronic annotation. Source: Compara

mesonephros development

Inferred from electronic annotation. Source: Compara

metanephric mesenchymal cell proliferation involved in metanephros development

Inferred from electronic annotation. Source: Compara

metanephric mesenchyme morphogenesis

Inferred from electronic annotation. Source: Compara

monocyte aggregation

Inferred from electronic annotation. Source: Compara

negative regulation of MAP kinase activity

Inferred from electronic annotation. Source: Compara

negative regulation of Notch signaling pathway

Inferred from electronic annotation. Source: Compara

negative regulation of glomerular mesangial cell proliferation

Inferred from electronic annotation. Source: Compara

negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis

Inferred from electronic annotation. Source: Compara

negative regulation of mitosis

Inferred from electronic annotation. Source: Compara

negative regulation of neurogenesis

Inferred from electronic annotation. Source: Compara

negative regulation of neuron differentiation

Inferred from electronic annotation. Source: Compara

negative regulation of prostatic bud formation

Inferred from electronic annotation. Source: Compara

negative regulation of transcription, DNA-dependent

Inferred from electronic annotation. Source: Compara

nephrogenic mesenchyme morphogenesis

Inferred from electronic annotation. Source: Compara

odontogenesis of dentin-containing tooth

Inferred from electronic annotation. Source: Compara

pathway-restricted SMAD protein phosphorylation

Inferred from electronic annotation. Source: Compara

positive regulation of apoptotic process

Inferred from electronic annotation. Source: Compara

positive regulation of bone mineralization

Inferred from electronic annotation. Source: Compara

positive regulation of dendrite development

Inferred from electronic annotation. Source: Compara

positive regulation of heterotypic cell-cell adhesion

Inferred from electronic annotation. Source: Compara

positive regulation of hyaluranon cable assembly

Inferred from electronic annotation. Source: Compara

positive regulation of neuron differentiation

Inferred from electronic annotation. Source: Compara

positive regulation of osteoblast differentiation

Inferred from electronic annotation. Source: Compara

positive regulation of peptidyl-threonine phosphorylation

Inferred from electronic annotation. Source: Compara

positive regulation of transcription from RNA polymerase II promoter

Inferred from electronic annotation. Source: Compara

protein localization to nucleus

Inferred from electronic annotation. Source: Compara

regulation of branching involved in prostate gland morphogenesis

Inferred from electronic annotation. Source: Compara

steroid hormone mediated signaling pathway

Inferred from electronic annotation. Source: Compara

ureteric bud development

Inferred from sequence or structural similarity. Source: UniProtKB

   Cellular_componentextracellular space

Inferred from electronic annotation. Source: Compara

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAA31853.1
Non-terminal residue1411 EMBL BAA31853.1

Sequences

Sequence LengthMass (Da)Tools
O88684 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 1A02FA2213F39812

FASTA14115,850
        10         20         30         40         50         60 
MVAFFKATEV HLRSIRSTGG KQRSQNRSKT PKNQEALRMA SVAENSSSDQ RQACKKHELY 

        70         80         90        100        110        120 
VSFRDLGWQD WIIAPEGYAA YYCEGECAFP LNSYMNATNH AIVQTLVHFI NPDTVPKPCC 

       130        140 
APTQLNAISV LYFDDSSNVI L 

« Hide

References

[1]"Transcripts for two members of the transforming growth factor-beta superfamily BMP-3 and BMP-7 are expressed in developing rat embryos."
Takahashi H., Ikeda T.
Dev. Dyn. 207:439-449(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Wistar EMBL BAA31853.1.
Tissue: Whole body EMBL BAA31853.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D29769 mRNA. Translation: BAA31853.1.
IPIIPI00357998.
UniGeneRn.18030.

3D structure databases

HSSPHSSP built from PDB template 1M4U based on UniProtKB P18075.
ProteinModelPortalO88684.
ModBaseSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000009656.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGNOG272883.
HOVERGENHBG004860.
InParanoidO88684.
OrthoDBEOG4GB76H.

Gene expression databases

GenevestigatorO88684.

Family and domain databases

InterProIPR002405. Inhibin_asu.
IPR001839. TGF-b_C.
IPR015615. TGF-beta-rel.
IPR017948. TGFb_CS.
[Graphical view]
PANTHERPTHR11848. PTHR11848. 1 hit.
PfamPF00019. TGF_beta. 1 hit.
[Graphical view]
PRINTSPR00669. INHIBINA.
SMARTSM00204. TGFB. 1 hit.
[Graphical view]
PROSITEPS00250. TGF_BETA_1. 1 hit.
PS51362. TGF_BETA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO88684_RAT
AccessionPrimary (citable) accession number: O88684
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)