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O88410

- CXCR3_MOUSE

UniProt

O88410 - CXCR3_MOUSE

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Protein

C-X-C chemokine receptor type 3

Gene
Cxcr3, Cmkar3
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at transcript leveli

Functioni

Receptor for the C-X-C chemokine CXCL9, CXCL10 and CXCL11 and mediates the proliferation, survival and angiogenic activity of mesangial cells through a heterotrimeric G-protein signaling pathway. Probably promotes cell chemotaxis response By similarity. Binds to CCL21.2 Publications

GO - Molecular functioni

  1. C-X-C chemokine binding Source: UniProtKB
  2. C-X-C chemokine receptor activity Source: Ensembl
  3. receptor activity Source: UniProtKB

GO - Biological processi

  1. angiogenesis Source: UniProtKB-KW
  2. calcium-mediated signaling Source: Ensembl
  3. chemokine (C-C motif) ligand 11 production Source: UniProtKB
  4. G-protein coupled receptor signaling pathway Source: UniProtKB
  5. inflammatory response Source: InterPro
  6. negative regulation of angiogenesis Source: Ensembl
  7. negative regulation of endothelial cell proliferation Source: Ensembl
  8. negative regulation of execution phase of apoptosis Source: UniProtKB
  9. positive regulation of angiogenesis Source: UniProtKB
  10. positive regulation of cAMP-mediated signaling Source: Ensembl
  11. positive regulation of cAMP metabolic process Source: Ensembl
  12. positive regulation of cell proliferation Source: UniProtKB
  13. positive regulation of chemotaxis Source: UniProtKB
  14. positive regulation of cytosolic calcium ion concentration Source: Ensembl
  15. positive regulation of execution phase of apoptosis Source: Ensembl
  16. positive regulation of release of sequestered calcium ion into cytosol Source: UniProtKB
  17. positive regulation of transcription from RNA polymerase II promoter Source: Ensembl
  18. regulation of leukocyte migration Source: InterPro
  19. T cell chemotaxis Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

G-protein coupled receptor, Receptor, Transducer

Keywords - Biological processi

Angiogenesis, Chemotaxis

Names & Taxonomyi

Protein namesi
Recommended name:
C-X-C chemokine receptor type 3
Short name:
CXC-R3
Short name:
CXCR-3
Alternative name(s):
Interferon-inducible protein 10 receptor
Short name:
IP-10 receptor
CD_antigen: CD183
Gene namesi
Name:Cxcr3
Synonyms:Cmkar3
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome X

Organism-specific databases

MGIiMGI:1277207. Cxcr3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 5252Extracellular Reviewed predictionAdd
BLAST
Transmembranei53 – 7927Helical; Name=1; Reviewed predictionAdd
BLAST
Topological domaini80 – 889Cytoplasmic Reviewed prediction
Transmembranei89 – 10921Helical; Name=2; Reviewed predictionAdd
BLAST
Topological domaini110 – 12415Extracellular Reviewed predictionAdd
BLAST
Transmembranei125 – 14622Helical; Name=3; Reviewed predictionAdd
BLAST
Topological domaini147 – 16822Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei169 – 18820Helical; Name=4; Reviewed predictionAdd
BLAST
Topological domaini189 – 21123Extracellular Reviewed predictionAdd
BLAST
Transmembranei212 – 23221Helical; Name=5; Reviewed predictionAdd
BLAST
Topological domaini233 – 25422Cytoplasmic Reviewed predictionAdd
BLAST
Transmembranei255 – 27622Helical; Name=6; Reviewed predictionAdd
BLAST
Topological domaini277 – 29721Extracellular Reviewed predictionAdd
BLAST
Transmembranei298 – 32023Helical; Name=7; Reviewed predictionAdd
BLAST
Topological domaini321 – 36747Cytoplasmic Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. cell surface Source: MGI
  2. external side of plasma membrane Source: MGI
  3. integral component of membrane Source: UniProtKB-KW
  4. plasma membrane Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 367367C-X-C chemokine receptor type 3PRO_0000069347Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi22 – 221N-linked (GlcNAc...) Reviewed prediction
Modified residuei27 – 271Sulfotyrosine By similarity
Modified residuei29 – 291Sulfotyrosine By similarity
Glycosylationi32 – 321N-linked (GlcNAc...) Reviewed prediction
Disulfide bondi123 ↔ 202 By similarity

Post-translational modificationi

Sulfation on Tyr-27 and Tyr-29 is essential for CXCL10 binding By similarity.
N-glycosylated By similarity.

Keywords - PTMi

Disulfide bond, Glycoprotein, Sulfation

Proteomic databases

PRIDEiO88410.

PTM databases

PhosphoSiteiO88410.

Expressioni

Tissue specificityi

Expresses in lymphoid organs and Th1 cells.1 Publication

Gene expression databases

BgeeiO88410.
CleanExiMM_CXCR3.
GenevestigatoriO88410.

Interactioni

Subunit structurei

Homomer. Forms heteromers with ACKR4 By similarity.

Structurei

3D structure databases

ProteinModelPortaliO88410.
SMRiO88410. Positions 59-325.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG150428.
GeneTreeiENSGT00730000110292.
HOGENOMiHOG000234122.
HOVERGENiHBG106917.
InParanoidiO88410.
KOiK04188.
OMAiAYCYARI.
OrthoDBiEOG7F5126.
PhylomeDBiO88410.
TreeFamiTF330966.

Family and domain databases

Gene3Di1.20.1070.10. 1 hit.
InterProiIPR004070. Chemokine_CXCR3.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view]
PANTHERiPTHR24227. PTHR24227. 1 hit.
PTHR24227:SF27. PTHR24227:SF27. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00657. CCCHEMOKINER.
PR01532. CXCCHMKINER3.
PR00237. GPCRRHODOPSN.
PROSITEiPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88410-1 [UniParc]FASTAAdd to Basket

« Hide

MYLEVSERQV LDASDFAFLL ENSTSPYDYG ENESDFSDSP PCPQDFSLNF    50
DRTFLPALYS LLFLLGLLGN GAVAAVLLSQ RTALSSTDTF LLHLAVADVL 100
LVLTLPLWAV DAAVQWVFGP GLCKVAGALF NINFYAGAFL LACISFDRYL 150
SIVHATQIYR RDPRVRVALT CIVVWGLCLL FALPDFIYLS ANYDQRLNAT 200
HCQYNFPQVG RTALRVLQLV AGFLLPLLVM AYCYAHILAV LLVSRGQRRF 250
RAMRLVVVVV AAFAVCWTPY HLVVLVDILM DVGVLARNCG RESHVDVAKS 300
VTSGMGYMHC CLNPLLYAFV GVKFREQMWM LFTRLGRSDQ RGPQRQPSSS 350
RRESSWSETT EASYLGL 367
Length:367
Mass (Da):41,018
Last modified:September 27, 2005 - v2
Checksum:iEF0348A8358AD951
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti16 – 161F → S in AAH96626. 1 Publication
Sequence conflicti292 – 2921E → K in AAC40163. 1 Publication
Sequence conflicti327 – 3271Q → K in AAC40163. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF045146 mRNA. Translation: AAC40163.1.
AB003174 mRNA. Translation: BAA34045.1.
BC096626 mRNA. Translation: AAH96626.1.
CCDSiCCDS30319.1.
PIRiJE0349.
RefSeqiNP_034040.1. NM_009910.2.
UniGeneiMm.12876.

Genome annotation databases

EnsembliENSMUST00000056614; ENSMUSP00000052444; ENSMUSG00000050232.
GeneIDi12766.
KEGGimmu:12766.
UCSCiuc009tye.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF045146 mRNA. Translation: AAC40163.1 .
AB003174 mRNA. Translation: BAA34045.1 .
BC096626 mRNA. Translation: AAH96626.1 .
CCDSi CCDS30319.1.
PIRi JE0349.
RefSeqi NP_034040.1. NM_009910.2.
UniGenei Mm.12876.

3D structure databases

ProteinModelPortali O88410.
SMRi O88410. Positions 59-325.
ModBasei Search...
MobiDBi Search...

Chemistry

BindingDBi O88410.
ChEMBLi CHEMBL5200.
GuidetoPHARMACOLOGYi 70.

Protein family/group databases

GPCRDBi Search...

PTM databases

PhosphoSitei O88410.

Proteomic databases

PRIDEi O88410.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000056614 ; ENSMUSP00000052444 ; ENSMUSG00000050232 .
GeneIDi 12766.
KEGGi mmu:12766.
UCSCi uc009tye.1. mouse.

Organism-specific databases

CTDi 2833.
MGIi MGI:1277207. Cxcr3.

Phylogenomic databases

eggNOGi NOG150428.
GeneTreei ENSGT00730000110292.
HOGENOMi HOG000234122.
HOVERGENi HBG106917.
InParanoidi O88410.
KOi K04188.
OMAi AYCYARI.
OrthoDBi EOG7F5126.
PhylomeDBi O88410.
TreeFami TF330966.

Miscellaneous databases

NextBioi 282126.
PROi O88410.
SOURCEi Search...

Gene expression databases

Bgeei O88410.
CleanExi MM_CXCR3.
Genevestigatori O88410.

Family and domain databases

Gene3Di 1.20.1070.10. 1 hit.
InterProi IPR004070. Chemokine_CXCR3.
IPR000355. Chemokine_rcpt.
IPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
[Graphical view ]
PANTHERi PTHR24227. PTHR24227. 1 hit.
PTHR24227:SF27. PTHR24227:SF27. 1 hit.
Pfami PF00001. 7tm_1. 1 hit.
[Graphical view ]
PRINTSi PR00657. CCCHEMOKINER.
PR01532. CXCCHMKINER3.
PR00237. GPCRRHODOPSN.
PROSITEi PS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION.
  2. "Cloning of the murine interferon-inducible protein 10 (IP-10) receptor and its specific expression in lymphoid organs."
    Tamaru M., Tominaga Y., Yatunami K., Narumi S.
    Biochem. Biophys. Res. Commun. 251:41-48(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, FUNCTION.
    Tissue: Blood.
  3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6NCr.
    Tissue: Hematopoietic stem cell.

Entry informationi

Entry nameiCXCR3_MOUSE
AccessioniPrimary (citable) accession number: O88410
Secondary accession number(s): Q4V9Y6, Q9QWN6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: September 27, 2005
Last modified: July 9, 2014
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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