O88307 (SORL_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 29, 2013.
Version 118.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sortilin-related receptor Alternative name(s): Gp250 Low-density lipoprotein receptor relative with 11 ligand-binding repeats Short name=LDLR relative with 11 ligand-binding repeats Short name=LR11 SorLA-1 Sorting protein-related receptor containing LDLR class A repeats Short name=mSorLA | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) [Reference proteome] | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 2215 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | Likely to be a multifunctional endocytic receptor, that may be implicated in the uptake of lipoproteins and of proteases. Binds LDL, the major cholesterol-carrying lipoprotein of plasma, and transports it into cells by endocytosis. Binds the receptor-associated protein (RAP). Could play a role in cell-cell interaction. May play a role in neural organization, as well as the establishment of embryonic organ systems. |
| Subunit structure | Interacts with GGA1 and ROCK2 By similarity. |
| Subcellular location | Membrane; Single-pass type I membrane protein Potential. |
| Tissue specificity | Abundant in brain, where it is mainly expressed in adult cerebellum, hippocampal ca regions, dentate gyrus, and to a much lesser extent in the cerebral cortex. Detectable in kidney, skeletal muscle, lung and spleen, but not in the liver. |
| Developmental stage | Expressed as early as embryonic day 6.5 (E6.5) and peaks at E11, the main location is in the CNS during development. At early stages, it is abundant in a subpopulation of neurons in the cerebral cortex, in the hippocampus, and granular and Purkinje cell layers in the cerebellum, whereas in the adult, expression in cerebellar granular cells and in the cerebral cortex is low. Expression occurs also in a variety of glands and organs during organogenesis. |
| Post-translational modification | The propeptide removed in the N-terminus may be cleaved by furin or homologous proteases By similarity. |
| Sequence similarities | Belongs to the VPS10-related sortilin family. SORL1 subfamily. Contains 5 BNR repeats. Contains 1 EGF-like domain. Contains 6 fibronectin type-III domains. Contains 11 LDL-receptor class A domains. Contains 5 LDL-receptor class B repeats. |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 28 | 28 | Potential | ||||||||
| Propeptide | 29 – 81 | 53 | Removed in mature form By similarity | PRO_0000033166 | |||||||
| Chain | 82 – 2215 | 2134 | Sortilin-related receptor | PRO_0000033167 | |||||||
Regions | |||||||||||
| Topological domain | 82 – 2138 | 2057 | Extracellular Potential | ||||||||
| Transmembrane | 2139 – 2159 | 21 | Helical; Potential | ||||||||
| Topological domain | 2160 – 2215 | 56 | Cytoplasmic Potential | ||||||||
| Repeat | 136 – 147 | 12 | BNR 1 | ||||||||
| Repeat | 232 – 243 | 12 | BNR 2 | ||||||||
| Repeat | 441 – 452 | 12 | BNR 3 | ||||||||
| Repeat | 521 – 532 | 12 | BNR 4 | ||||||||
| Repeat | 562 – 573 | 12 | BNR 5 | ||||||||
| Repeat | 800 – 843 | 44 | LDL-receptor class B 1 | ||||||||
| Repeat | 844 – 887 | 44 | LDL-receptor class B 2 | ||||||||
| Repeat | 888 – 932 | 45 | LDL-receptor class B 3 | ||||||||
| Repeat | 933 – 972 | 40 | LDL-receptor class B 4 | ||||||||
| Repeat | 973 – 1013 | 41 | LDL-receptor class B 5 | ||||||||
| Domain | 1026 – 1072 | 47 | EGF-like | ||||||||
| Domain | 1076 – 1114 | 39 | LDL-receptor class A 1 | ||||||||
| Domain | 1115 – 1155 | 41 | LDL-receptor class A 2 | ||||||||
| Domain | 1156 – 1194 | 39 | LDL-receptor class A 3 | ||||||||
| Domain | 1198 – 1236 | 39 | LDL-receptor class A 4 | ||||||||
| Domain | 1238 – 1272 | 35 | LDL-receptor class A 5 | ||||||||
| Domain | 1273 – 1317 | 45 | LDL-receptor class A 6 | ||||||||
| Domain | 1323 – 1361 | 39 | LDL-receptor class A 7 | ||||||||
| Domain | 1366 – 1405 | 40 | LDL-receptor class A 8 | ||||||||
| Domain | 1417 – 1455 | 39 | LDL-receptor class A 9 | ||||||||
| Domain | 1469 – 1508 | 40 | LDL-receptor class A 10 | ||||||||
| Domain | 1512 – 1551 | 40 | LDL-receptor class A 11 | ||||||||
| Domain | 1554 – 1646 | 93 | Fibronectin type-III 1 | ||||||||
| Domain | 1651 – 1742 | 92 | Fibronectin type-III 2 | ||||||||
| Domain | 1751 – 1839 | 89 | Fibronectin type-III 3 | ||||||||
| Domain | 1844 – 1928 | 85 | Fibronectin type-III 4 | ||||||||
| Domain | 1935 – 2024 | 90 | Fibronectin type-III 5 | ||||||||
| Domain | 2025 – 2119 | 95 | Fibronectin type-III 6 | ||||||||
| Motif | 2173 – 2178 | 6 | Endocytosis signal Potential | ||||||||
Amino acid modifications | |||||||||||
| Modified residue | 114 | 1 | Phosphoserine By similarity | ||||||||
| Modified residue | 2207 | 1 | Phosphoserine; by ROCK2 By similarity | ||||||||
| Glycosylation | 99 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 158 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 367 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 368 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 430 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 616 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 674 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 818 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 871 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1035 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1068 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1164 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1191 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1246 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1367 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1458 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1608 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1706 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1733 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1810 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1855 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1895 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 1987 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2011 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2055 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2070 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2077 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 2093 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 1078 ↔ 1090 | By similarity | |||||||||
| Disulfide bond | 1085 ↔ 1103 | By similarity | |||||||||
| Disulfide bond | 1097 ↔ 1112 | By similarity | |||||||||
| Disulfide bond | 1117 ↔ 1131 | By similarity | |||||||||
| Disulfide bond | 1125 ↔ 1144 | By similarity | |||||||||
| Disulfide bond | 1138 ↔ 1153 | By similarity | |||||||||
| Disulfide bond | 1158 ↔ 1170 | By similarity | |||||||||
| Disulfide bond | 1165 ↔ 1183 | By similarity | |||||||||
| Disulfide bond | 1177 ↔ 1192 | By similarity | |||||||||
| Disulfide bond | 1199 ↔ 1211 | By similarity | |||||||||
| Disulfide bond | 1206 ↔ 1224 | By similarity | |||||||||
| Disulfide bond | 1218 ↔ 1235 | By similarity | |||||||||
| Disulfide bond | 1239 ↔ 1249 | By similarity | |||||||||
| Disulfide bond | 1244 ↔ 1262 | By similarity | |||||||||
| Disulfide bond | 1256 ↔ 1271 | By similarity | |||||||||
| Disulfide bond | 1275 ↔ 1289 | By similarity | |||||||||
| Disulfide bond | 1283 ↔ 1302 | By similarity | |||||||||
| Disulfide bond | 1296 ↔ 1315 | By similarity | |||||||||
| Disulfide bond | 1325 ↔ 1337 | By similarity | |||||||||
| Disulfide bond | 1332 ↔ 1350 | By similarity | |||||||||
| Disulfide bond | 1344 ↔ 1359 | By similarity | |||||||||
| Disulfide bond | 1368 ↔ 1381 | By similarity | |||||||||
| Disulfide bond | 1376 ↔ 1394 | By similarity | |||||||||
| Disulfide bond | 1388 ↔ 1403 | By similarity | |||||||||
| Disulfide bond | 1419 ↔ 1431 | By similarity | |||||||||
| Disulfide bond | 1426 ↔ 1444 | By similarity | |||||||||
| Disulfide bond | 1438 ↔ 1453 | By similarity | |||||||||
| Disulfide bond | 1471 ↔ 1484 | By similarity | |||||||||
| Disulfide bond | 1478 ↔ 1497 | By similarity | |||||||||
| Disulfide bond | 1491 ↔ 1506 | By similarity | |||||||||
| Disulfide bond | 1514 ↔ 1527 | By similarity | |||||||||
| Disulfide bond | 1521 ↔ 1540 | By similarity | |||||||||
| Disulfide bond | 1534 ↔ 1549 | By similarity | |||||||||
Experimental info | |||||||||||
| Sequence conflict | 706 | 1 | S → F in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 768 | 1 | S → F in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 785 | 1 | S → W in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 796 | 1 | D → G in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 953 | 1 | R → G in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1268 – 1269 | 2 | EQ → DE in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1425 | 1 | H → A in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1425 | 1 | H → R in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 1425 | 1 | H → R in CAA72732. Ref.4 | ||||||||
| Sequence conflict | 1468 | 1 | F → L in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1468 | 1 | F → L in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 1468 | 1 | F → L in CAA72732. Ref.4 | ||||||||
| Sequence conflict | 1663 | 1 | S → R in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1663 | 1 | S → R in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 1663 | 1 | S → R in CAA72732. Ref.4 | ||||||||
| Sequence conflict | 1709 – 1713 | 5 | EIKNL → KKKKK in CAA72732. Ref.4 | ||||||||
| Sequence conflict | 1807 | 1 | R → K in BAA31219. Ref.1 | ||||||||
| Sequence conflict | 1807 | 1 | R → K in AAC16739. Ref.3 | ||||||||
| Sequence conflict | 2130 | 1 | Q → H in BAA31219. Ref.1 | ||||||||
Sequences
| ||||||||||||||||||
References
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB015790 mRNA. Translation: BAA31219.1. AK147303 mRNA. Translation: BAE27834.1. AF031816 mRNA. Translation: AAC16739.1. Y12004 mRNA. Translation: CAA72732.1. |
| IPI | IPI00129831. |
| PIR | T00348. |
| RefSeq | NP_035566.2. NM_011436.3. |
| UniGene | Mm.121920. |
3D structure databases | |
| ProteinModelPortal | O88307. |
| SMR | O88307. Positions 1156-1193, 1651-1745. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-42439N. |
| MINT | MINT-1342356. |
PTM databases | |
| PhosphoSite | O88307. |
Proteomic databases | |
| PaxDb | O88307. |
| PRIDE | O88307. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000060989; ENSMUSP00000058613; ENSMUSG00000049313. |
| GeneID | 20660. |
| KEGG | mmu:20660. |
| UCSC | uc009pap.1. mouse. |
Organism-specific databases | |
| CTD | 6653. |
| MGI | MGI:1202296. Sorl1. |
Phylogenomic databases | |
| eggNOG | NOG281049. |
| GeneTree | ENSGT00700000104463. |
| HOGENOM | HOG000007009. |
| HOVERGEN | HBG017830. |
| InParanoid | Q3UHM3. |
| OMA | TNVYISS. |
| OrthoDB | EOG46DM1T. |
Gene expression databases | |
| ArrayExpress | O88307. |
| Bgee | O88307. |
| Genevestigator | O88307. |
| GermOnline | ENSMUSG00000049313. Mus musculus. |
Family and domain databases | |
| Gene3D | 2.120.10.30. 1 hit. 2.60.40.10. 4 hits. 4.10.400.10. 11 hits. |
| InterPro | IPR011042. 6-blade_b-propeller_TolB-like. IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR023415. LDLR_class-A_CS. IPR000033. LDLR_classB_rpt. IPR002172. LDrepeatLR_classA_rpt. IPR006581. VPS10. [Graphical view] |
| Pfam | PF00041. fn3. 3 hits. PF00057. Ldl_recept_a. 10 hits. PF00058. Ldl_recept_b. 2 hits. [Graphical view] |
| SMART | SM00060. FN3. 6 hits. SM00192. LDLa. 11 hits. SM00135. LY. 5 hits. SM00602. VPS10. 1 hit. [Graphical view] |
| SUPFAM | SSF49265. FN_III-like. 5 hits. SSF57424. LDL_rcpt_classA_cys-rich. 11 hits. |
| PROSITE | PS01186. EGF_2. 1 hit. PS50026. EGF_3. False negative. PS50853. FN3. 6 hits. PS01209. LDLRA_1. 10 hits. PS50068. LDLRA_2. 11 hits. PS51120. LDLRB. 5 hits. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 299101. |
| SOURCE | Search... |
Entry information
| Entry name | SORL_MOUSE | ||||||||
| Accession | Primary (citable) accession number: O88307 Secondary accession number(s): O54711, O70581, Q3UHM3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
