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O88207

- CO5A1_MOUSE

UniProt

O88207 - CO5A1_MOUSE

Protein

Collagen alpha-1(V) chain

Gene

Col5a1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 116 (01 Oct 2014)
      Sequence version 2 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Type V collagen is a member of group I collagen (fibrillar forming collagen). It is a minor connective tissue component of nearly ubiquitous distribution. Type V collagen binds to DNA, heparan sulfate, thrombospondin, heparin, and insulin By similarity. Transcriptionally activated by CEBPZ, which recognizes a CCAAT-like motif, CAAAT in the COL5A1 promoter.By similarity1 Publication

    GO - Molecular functioni

    1. extracellular matrix structural constituent Source: MGI
    2. heparin binding Source: UniProtKB-KW
    3. protein binding Source: MGI

    GO - Biological processi

    1. blood vessel development Source: MGI
    2. cell adhesion Source: Ensembl
    3. collagen biosynthetic process Source: Ensembl
    4. collagen fibril organization Source: MGI
    5. extracellular fibril organization Source: Ensembl
    6. eye morphogenesis Source: Ensembl
    7. heart morphogenesis Source: MGI
    8. integrin biosynthetic process Source: Ensembl
    9. regulation of cellular component organization Source: MGI
    10. skin development Source: MGI
    11. tendon development Source: MGI
    12. wound healing, spreading of epidermal cells Source: Ensembl

    Keywords - Ligandi

    Heparin-binding

    Enzyme and pathway databases

    ReactomeiREACT_196606. ECM proteoglycans.
    REACT_196607. Non-integrin membrane-ECM interactions.
    REACT_196644. Syndecan interactions.
    REACT_198984. Collagen biosynthesis and modifying enzymes.
    REACT_199046. Assembly of collagen fibrils and other multimeric structures.
    REACT_199055. Collagen degradation.
    REACT_206066. Extracellular matrix organization.
    REACT_216309. Integrin cell surface interactions.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Collagen alpha-1(V) chain
    Gene namesi
    Name:Col5a1
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:88457. Col5a1.

    Subcellular locationi

    Secretedextracellular spaceextracellular matrix PROSITE-ProRule annotation

    GO - Cellular componenti

    1. basement membrane Source: MGI
    2. collagen trimer Source: MGI
    3. collagen type V trimer Source: Ensembl
    4. extracellular matrix Source: MGI

    Keywords - Cellular componenti

    Extracellular matrix, Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3636Sequence AnalysisAdd
    BLAST
    Chaini37 – 18381802Collagen alpha-1(V) chainPRO_0000041761Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei234 – 2341SulfotyrosineSequence Analysis
    Modified residuei236 – 2361SulfotyrosineSequence Analysis
    Modified residuei240 – 2401SulfotyrosineSequence Analysis
    Modified residuei262 – 2621SulfotyrosineSequence Analysis
    Modified residuei263 – 2631SulfotyrosineSequence Analysis
    Modified residuei570 – 57014-hydroxyprolineBy similarity
    Modified residuei576 – 57614-hydroxyprolineBy similarity
    Modified residuei621 – 62114-hydroxyprolineBy similarity
    Modified residuei627 – 62715-hydroxylysineBy similarity
    Modified residuei639 – 63914-hydroxyprolineBy similarity
    Modified residuei642 – 64215-hydroxylysineBy similarity
    Modified residuei648 – 64814-hydroxyprolineBy similarity
    Modified residuei654 – 65414-hydroxyprolineBy similarity
    Modified residuei657 – 65714-hydroxyprolineBy similarity
    Modified residuei675 – 67514-hydroxyprolineBy similarity
    Modified residuei678 – 67814-hydroxyprolineBy similarity
    Modified residuei680 – 68013-hydroxyprolineBy similarity
    Modified residuei686 – 68613-hydroxyprolineBy similarity
    Modified residuei690 – 69014-hydroxyprolineBy similarity
    Modified residuei696 – 69614-hydroxyprolineBy similarity
    Modified residuei705 – 70514-hydroxyprolineBy similarity
    Modified residuei708 – 70815-hydroxylysineBy similarity
    Modified residuei717 – 71714-hydroxyprolineBy similarity
    Modified residuei720 – 72014-hydroxyprolineBy similarity
    Modified residuei726 – 72614-hydroxyprolineBy similarity
    Modified residuei732 – 73214-hydroxyprolineBy similarity
    Modified residuei744 – 74415-hydroxylysineBy similarity
    Modified residuei750 – 75014-hydroxyprolineBy similarity
    Modified residuei756 – 75614-hydroxyprolineBy similarity
    Modified residuei762 – 76214-hydroxyprolineBy similarity
    Modified residuei765 – 76514-hydroxyprolineBy similarity
    Modified residuei771 – 77114-hydroxyprolineBy similarity
    Modified residuei774 – 77415-hydroxylysineBy similarity
    Modified residuei780 – 78014-hydroxyprolineBy similarity
    Modified residuei789 – 78914-hydroxyprolineBy similarity
    Modified residuei795 – 79515-hydroxylysineBy similarity
    Modified residuei804 – 80415-hydroxylysineBy similarity
    Modified residuei807 – 80715-hydroxylysineBy similarity
    Modified residuei810 – 81015-hydroxylysineBy similarity
    Modified residuei816 – 81614-hydroxyprolineBy similarity
    Modified residuei819 – 81915-hydroxylysineBy similarity
    Modified residuei834 – 83414-hydroxyprolineBy similarity
    Modified residuei846 – 84615-hydroxylysineBy similarity
    Modified residuei864 – 86415-hydroxylysineBy similarity
    Modified residuei870 – 87014-hydroxyprolineBy similarity
    Modified residuei873 – 87314-hydroxyprolineBy similarity
    Modified residuei876 – 87614-hydroxyprolineBy similarity
    Modified residuei882 – 88215-hydroxylysineBy similarity
    Modified residuei888 – 88814-hydroxyprolineBy similarity
    Modified residuei891 – 89114-hydroxyprolineBy similarity
    Modified residuei897 – 89715-hydroxylysineBy similarity
    Modified residuei903 – 90314-hydroxyprolineBy similarity
    Modified residuei906 – 90614-hydroxyprolineBy similarity
    Modified residuei930 – 93014-hydroxyprolineBy similarity
    Modified residuei945 – 94514-hydroxyprolineBy similarity
    Modified residuei1017 – 101714-hydroxyprolineBy similarity
    Modified residuei1020 – 102014-hydroxyprolineBy similarity
    Modified residuei1023 – 102314-hydroxyprolineBy similarity
    Modified residuei1029 – 102914-hydroxyprolineBy similarity
    Modified residuei1221 – 122114-hydroxyprolineBy similarity
    Modified residuei1224 – 122414-hydroxyprolineBy similarity
    Modified residuei1467 – 146714-hydroxyprolineBy similarity
    Modified residuei1470 – 147014-hydroxyprolineBy similarity
    Modified residuei1601 – 16011SulfotyrosineSequence Analysis
    Modified residuei1604 – 16041SulfotyrosineSequence Analysis

    Post-translational modificationi

    Hydroxylation on proline residues within the sequence motif, GXPG, is most likely to be 4-hydroxy as this fits the requirement for 4-hydroxylation in vertebrates.By similarity
    Sulfated on 40% of tyrosines.By similarity

    Keywords - PTMi

    Hydroxylation, Sulfation

    Proteomic databases

    PaxDbiO88207.
    PRIDEiO88207.

    PTM databases

    PhosphoSiteiO88207.

    Expressioni

    Tissue specificityi

    Expressed in limbs, vertebrae, heart, brain, liver, intestine, tongue, tail, skin, calvaria, lung and kidney of E18 embryos.1 Publication

    Developmental stagei

    Detected at E11, E12, E14, E16 and E18.1 Publication

    Gene expression databases

    ArrayExpressiO88207.
    BgeeiO88207.
    CleanExiMM_COL5A1.
    GenevestigatoriO88207.

    Interactioni

    Subunit structurei

    Trimers of two alpha 1(V) and one alpha 2(V) chains in most tissues and trimers of one alpha 1(V), one alpha 2(V), and one alpha 3(V) chains in placenta. Interacts with CSPG4 By similarity.By similarity

    Protein-protein interaction databases

    BioGridi198821. 5 interactions.
    IntActiO88207. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliO88207.
    SMRiO88207. Positions 63-208, 1628-1837.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini72 – 244173Laminin G-likeAdd
    BLAST
    Domaini1609 – 1837229Fibrillar collagen NC1PROSITE-ProRule annotationAdd
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni231 – 443213Nonhelical regionBy similarityAdd
    BLAST
    Regioni444 – 558115Interrupted collagenous regionBy similarityAdd
    BLAST
    Regioni559 – 15701012Triple-helical regionBy similarityAdd
    BLAST
    Regioni1571 – 160535Nonhelical regionBy similarityAdd
    BLAST

    Sequence similaritiesi

    Belongs to the fibrillar collagen family.PROSITE-ProRule annotation
    Contains 1 fibrillar collagen NC1 domain.PROSITE-ProRule annotation
    Contains 1 laminin G-like domain.Curated

    Keywords - Domaini

    Collagen, Repeat, Signal

    Phylogenomic databases

    eggNOGiNOG12793.
    GeneTreeiENSGT00710000106385.
    HOGENOMiHOG000085654.
    HOVERGENiHBG004933.
    InParanoidiO88207.
    KOiK06236.
    OMAiPIGVVQM.
    OrthoDBiEOG7XPZ4W.
    PhylomeDBiO88207.
    TreeFamiTF323987.

    Family and domain databases

    Gene3Di2.60.120.200. 1 hit.
    InterProiIPR008160. Collagen.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR000885. Fib_collagen_C.
    IPR001791. Laminin_G.
    [Graphical view]
    PfamiPF01410. COLFI. 1 hit.
    PF01391. Collagen. 6 hits.
    PF02210. Laminin_G_2. 1 hit.
    [Graphical view]
    ProDomiPD002078. Fib_collagen_C. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SMARTiSM00038. COLFI. 1 hit.
    SM00282. LamG. 1 hit.
    SM00210. TSPN. 1 hit.
    [Graphical view]
    SUPFAMiSSF49899. SSF49899. 1 hit.
    PROSITEiPS51461. NC1_FIB. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O88207-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDVHTRWKAA RPGALLLSSP LLLFLLLLWA PPSSRAAQPA DLLEMLDFHN     50
    LPSGVTKTTG FCATRRSSSE PDVAYRVSKD AQLSMPTKQL YPESGFPEDF 100
    SILTTVKAKK GSQAFLVSIY NEQGIQQLGL ELGRSPVFLY EDHTGKPGPE 150
    EYPLFPGINL SDGKWHRIAL SVYKKNVTLI LDCKKKITKF LSRSDHPIID 200
    TNGIVMFGSR ILDDEIFEGD IQQLLFVSDN RAAYDYCEHY SPDCDTAVPD 250
    TPQSQDPNPD EYYPEGEGET YYYEYPYYED PEDPGKEPAP TQKPVEAARE 300
    TTEVPEEQTQ PLPEAPTVPE TSDTADKEDS LGIGDYDYVP PDDYYTPPPY 350
    EDFGYGEGVE NPDQPTNPDS GAEVPTSTTV TSNTSNPAPG EGKDDLGGEF 400
    TEETIKNLEE NYYDPYFDPD SDSSVSPSEI GPGMPANQDT IFEGIGGPRG 450
    EKGQKGEPAI IEPGMLIEGP PGPEGPAGLP GPPGTTGPTG QMGDPGERGP 500
    PGRPGLPGAD GLPGPPGTML MLPFRFGGGG DAGSKGPMVS AQESQAQAIL 550
    QQARLALRGP AGPMGLTGRP GPMGPPGSGG LKGEPGDMGP QGPRGVQGPP 600
    GPTGKPGRRG RAGSDGARGM PGQTGPKGDR GFDGLAGLPG EKGHRGDPGP 650
    SGPPGIPGDD GERGDDGEVG PRGLPGEPGP RGLLGPKGPP GPPGPPGVTG 700
    MDGQPGPKGN VGPQGEPGPP GQQGNPGAQG LPGPQGAIGP PGEKGPLGKP 750
    GLPGMPGADG PPGHPGKEGP PGEKGGQGPP GPQGPIGYPG PRGVKGADGI 800
    RGLKGTKGEK GEDGFPGFKG DMGIKGDRGE IGPPGPRGED GPEGPKGRGG 850
    PNGDPGPLGP TGEKGKLGVP GLPGYPGRQG PKGSIGFPGF PGANGEKGGR 900
    GTPGKPGPRG QRGPTGPRGE RGPRGITGKP GPKGNSGGDG PAGPPGERGP 950
    NGPQGPTGFP GPKGPPGPPG KDGLPGHPGQ RGETGFQGKT GPPGPPGVVG 1000
    PQGPTGETGP MGERGHPGPP GPPGEQGLPG AAGKEGTKGD PGPAGLPGKD 1050
    GPPGLRGFPG DRGLPGPVGA LGLKGSEGPP GPPGPAGSPG ERGPAGAAGP 1100
    IGIPGRPGPQ GPPGPAGEKG LPGEKGPQGP AGRDGLQGPV GLPGPAGPVG 1150
    PPGEDGDKGE IGEPGQKGSK GDKGEQGPPG PTGPQGPIGQ PGPSGADGEP 1200
    GPRGQQGLFG QKGDEGSRGF PGPPGPVGLQ GLPGPPGEKG ETGDVGQMGP 1250
    PGPPGPRGPS GAPGADGPQG PPGGIGNPGA VGEKGEPGEA GDPGLPGEGG 1300
    PLGPKGERGE KGEAGPSGAA GPPGPKGPPG DDGPKGSPGP VGFPGDPGPP 1350
    GEPGPAGQDG PPGDKGDDGE PGQTGSPGPT GEPGPSGPPG KRGPPGPAGP 1400
    EGRQGEKGAK GEAGLEGPPG KTGPIGPQGA PGKPGPDGLR GIPGPVGEQG 1450
    LPGSPGPDGP PGPMGPPGLP GLKGDSGPKG EKGHPGLIGL IGPPGEQGEK 1500
    GDRGLPGPQG SSGPKGDQGI TGPSGPLGPP GPPGLPGPPG PKGAKGSSGP 1550
    TGPKGEAGHP GLPGPPGPPG EVIQPLPIQA SRTRRNIDAS QLLDDGAGES 1600
    YVDYADGMEE IFGSLNSLKL EIEQMKRPLG TQQNPARTCK DLQLCHPDFP 1650
    DGEYWVDPNQ GCSRDSFKVY CNFTAGGSTC VFPDKKSEGA RITSWPKENP 1700
    GSWFSEFKRG KLLSYVDAEG NPVGVVQMTF LRLLSASAHQ NVTYNCYQSV 1750
    AWQDAATGSY DKAIRFLGSN DEEMSYDNNP YIRALVDGCA TKKGYQKTVL 1800
    EIDTPKVEQV PIVDIMFNDF GEASQKFGFE VGPACFLG 1838
    Length:1,838
    Mass (Da):183,677
    Last modified:February 6, 2007 - v2
    Checksum:iD20F4E5198A09ECF
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti1097 – 10971A → S in BAA28786. (PubMed:9582436)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB009993 mRNA. Translation: BAA28786.1.
    AL731778, AL732513 Genomic DNA. Translation: CAM46247.1.
    AB098608 Genomic DNA. Translation: BAD26732.1.
    AK148055 mRNA. Translation: BAE28315.1.
    CCDSiCCDS15831.1.
    RefSeqiNP_056549.2. NM_015734.2.
    UniGeneiMm.7281.

    Genome annotation databases

    EnsembliENSMUST00000028280; ENSMUSP00000028280; ENSMUSG00000026837.
    GeneIDi12831.
    KEGGimmu:12831.
    UCSCiuc008ixt.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB009993 mRNA. Translation: BAA28786.1 .
    AL731778 , AL732513 Genomic DNA. Translation: CAM46247.1 .
    AB098608 Genomic DNA. Translation: BAD26732.1 .
    AK148055 mRNA. Translation: BAE28315.1 .
    CCDSi CCDS15831.1.
    RefSeqi NP_056549.2. NM_015734.2.
    UniGenei Mm.7281.

    3D structure databases

    ProteinModelPortali O88207.
    SMRi O88207. Positions 63-208, 1628-1837.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 198821. 5 interactions.
    IntActi O88207. 1 interaction.

    PTM databases

    PhosphoSitei O88207.

    Proteomic databases

    PaxDbi O88207.
    PRIDEi O88207.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000028280 ; ENSMUSP00000028280 ; ENSMUSG00000026837 .
    GeneIDi 12831.
    KEGGi mmu:12831.
    UCSCi uc008ixt.2. mouse.

    Organism-specific databases

    CTDi 1289.
    MGIi MGI:88457. Col5a1.

    Phylogenomic databases

    eggNOGi NOG12793.
    GeneTreei ENSGT00710000106385.
    HOGENOMi HOG000085654.
    HOVERGENi HBG004933.
    InParanoidi O88207.
    KOi K06236.
    OMAi PIGVVQM.
    OrthoDBi EOG7XPZ4W.
    PhylomeDBi O88207.
    TreeFami TF323987.

    Enzyme and pathway databases

    Reactomei REACT_196606. ECM proteoglycans.
    REACT_196607. Non-integrin membrane-ECM interactions.
    REACT_196644. Syndecan interactions.
    REACT_198984. Collagen biosynthesis and modifying enzymes.
    REACT_199046. Assembly of collagen fibrils and other multimeric structures.
    REACT_199055. Collagen degradation.
    REACT_206066. Extracellular matrix organization.
    REACT_216309. Integrin cell surface interactions.

    Miscellaneous databases

    NextBioi 282334.
    PROi O88207.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi O88207.
    Bgeei O88207.
    CleanExi MM_COL5A1.
    Genevestigatori O88207.

    Family and domain databases

    Gene3Di 2.60.120.200. 1 hit.
    InterProi IPR008160. Collagen.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR000885. Fib_collagen_C.
    IPR001791. Laminin_G.
    [Graphical view ]
    Pfami PF01410. COLFI. 1 hit.
    PF01391. Collagen. 6 hits.
    PF02210. Laminin_G_2. 1 hit.
    [Graphical view ]
    ProDomi PD002078. Fib_collagen_C. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SMARTi SM00038. COLFI. 1 hit.
    SM00282. LamG. 1 hit.
    SM00210. TSPN. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49899. SSF49899. 1 hit.
    PROSITEi PS51461. NC1_FIB. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "cDNA sequence and expression of the mouse alpha1(V) collagen gene."
      Wu Y.L., Sumiyoshi H., Khaleduzzaman M., Ninomiya Y., Yoshioka H.
      Biochim. Biophys. Acta 1397:275-284(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
      Tissue: Embryo.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    3. "Identification of a functional CBF-binding CCAAT-like motif in the core promoter of the mouse pro-alpha1(V) collagen gene (Col5a1)."
      Sakata-Takatani K., Matsuo N., Sumiyoshi H., Tsuda T., Yoshioka H.
      Matrix Biol. 23:87-99(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-30, FUNCTION.
    4. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1156-1838.
      Strain: C57BL/6J.

    Entry informationi

    Entry nameiCO5A1_MOUSE
    AccessioniPrimary (citable) accession number: O88207
    Secondary accession number(s): A3KGE3, Q3UG94, Q6F6B0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 13, 2005
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 116 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3