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O88207

- CO5A1_MOUSE

UniProt

O88207 - CO5A1_MOUSE

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Protein

Collagen alpha-1(V) chain

Gene

Col5a1

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli

Functioni

Type V collagen is a member of group I collagen (fibrillar forming collagen). It is a minor connective tissue component of nearly ubiquitous distribution. Type V collagen binds to DNA, heparan sulfate, thrombospondin, heparin, and insulin (By similarity). Transcriptionally activated by CEBPZ, which recognizes a CCAAT-like motif, CAAAT in the COL5A1 promoter.By similarity1 Publication

GO - Molecular functioni

  1. extracellular matrix structural constituent Source: MGI
  2. heparin binding Source: UniProtKB-KW

GO - Biological processi

  1. blood vessel development Source: MGI
  2. cell adhesion Source: Ensembl
  3. collagen biosynthetic process Source: Ensembl
  4. collagen fibril organization Source: MGI
  5. extracellular fibril organization Source: Ensembl
  6. eye morphogenesis Source: Ensembl
  7. heart morphogenesis Source: MGI
  8. integrin biosynthetic process Source: Ensembl
  9. regulation of cellular component organization Source: MGI
  10. skin development Source: MGI
  11. tendon development Source: MGI
  12. wound healing, spreading of epidermal cells Source: Ensembl
Complete GO annotation...

Keywords - Ligandi

Heparin-binding

Enzyme and pathway databases

ReactomeiREACT_196606. ECM proteoglycans.
REACT_196607. Non-integrin membrane-ECM interactions.
REACT_196644. Syndecan interactions.
REACT_198984. Collagen biosynthesis and modifying enzymes.
REACT_199046. Assembly of collagen fibrils and other multimeric structures.
REACT_199055. Collagen degradation.
REACT_206066. Extracellular matrix organization.
REACT_216309. Integrin cell surface interactions.
REACT_236183. NCAM1 interactions.
REACT_263353. Signaling by PDGF.

Names & Taxonomyi

Protein namesi
Recommended name:
Collagen alpha-1(V) chain
Gene namesi
Name:Col5a1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 2

Organism-specific databases

MGIiMGI:88457. Col5a1.

Subcellular locationi

Secretedextracellular spaceextracellular matrix PROSITE-ProRule annotation

GO - Cellular componenti

  1. basement membrane Source: MGI
  2. collagen trimer Source: MGI
  3. collagen type V trimer Source: Ensembl
  4. extracellular matrix Source: UniProtKB
  5. extracellular vesicular exosome Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Extracellular matrix, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3636Sequence AnalysisAdd
BLAST
Chaini37 – 18381802Collagen alpha-1(V) chainPRO_0000041761Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei234 – 2341SulfotyrosineSequence Analysis
Modified residuei236 – 2361SulfotyrosineSequence Analysis
Modified residuei240 – 2401SulfotyrosineSequence Analysis
Modified residuei262 – 2621SulfotyrosineSequence Analysis
Modified residuei263 – 2631SulfotyrosineSequence Analysis
Modified residuei570 – 57014-hydroxyprolineBy similarity
Modified residuei576 – 57614-hydroxyprolineBy similarity
Modified residuei621 – 62114-hydroxyprolineBy similarity
Modified residuei627 – 62715-hydroxylysineBy similarity
Modified residuei639 – 63914-hydroxyprolineBy similarity
Modified residuei642 – 64215-hydroxylysineBy similarity
Modified residuei648 – 64814-hydroxyprolineBy similarity
Modified residuei654 – 65414-hydroxyprolineBy similarity
Modified residuei657 – 65714-hydroxyprolineBy similarity
Modified residuei675 – 67514-hydroxyprolineBy similarity
Modified residuei678 – 67814-hydroxyprolineBy similarity
Modified residuei680 – 68013-hydroxyprolineBy similarity
Modified residuei686 – 68613-hydroxyprolineBy similarity
Modified residuei690 – 69014-hydroxyprolineBy similarity
Modified residuei696 – 69614-hydroxyprolineBy similarity
Modified residuei705 – 70514-hydroxyprolineBy similarity
Modified residuei708 – 70815-hydroxylysineBy similarity
Modified residuei717 – 71714-hydroxyprolineBy similarity
Modified residuei720 – 72014-hydroxyprolineBy similarity
Modified residuei726 – 72614-hydroxyprolineBy similarity
Modified residuei732 – 73214-hydroxyprolineBy similarity
Modified residuei744 – 74415-hydroxylysineBy similarity
Modified residuei750 – 75014-hydroxyprolineBy similarity
Modified residuei756 – 75614-hydroxyprolineBy similarity
Modified residuei762 – 76214-hydroxyprolineBy similarity
Modified residuei765 – 76514-hydroxyprolineBy similarity
Modified residuei771 – 77114-hydroxyprolineBy similarity
Modified residuei774 – 77415-hydroxylysineBy similarity
Modified residuei780 – 78014-hydroxyprolineBy similarity
Modified residuei789 – 78914-hydroxyprolineBy similarity
Modified residuei795 – 79515-hydroxylysineBy similarity
Modified residuei804 – 80415-hydroxylysineBy similarity
Modified residuei807 – 80715-hydroxylysineBy similarity
Modified residuei810 – 81015-hydroxylysineBy similarity
Modified residuei816 – 81614-hydroxyprolineBy similarity
Modified residuei819 – 81915-hydroxylysineBy similarity
Modified residuei834 – 83414-hydroxyprolineBy similarity
Modified residuei846 – 84615-hydroxylysineBy similarity
Modified residuei864 – 86415-hydroxylysineBy similarity
Modified residuei870 – 87014-hydroxyprolineBy similarity
Modified residuei873 – 87314-hydroxyprolineBy similarity
Modified residuei876 – 87614-hydroxyprolineBy similarity
Modified residuei882 – 88215-hydroxylysineBy similarity
Modified residuei888 – 88814-hydroxyprolineBy similarity
Modified residuei891 – 89114-hydroxyprolineBy similarity
Modified residuei897 – 89715-hydroxylysineBy similarity
Modified residuei903 – 90314-hydroxyprolineBy similarity
Modified residuei906 – 90614-hydroxyprolineBy similarity
Modified residuei930 – 93014-hydroxyprolineBy similarity
Modified residuei945 – 94514-hydroxyprolineBy similarity
Modified residuei1017 – 101714-hydroxyprolineBy similarity
Modified residuei1020 – 102014-hydroxyprolineBy similarity
Modified residuei1023 – 102314-hydroxyprolineBy similarity
Modified residuei1029 – 102914-hydroxyprolineBy similarity
Modified residuei1221 – 122114-hydroxyprolineBy similarity
Modified residuei1224 – 122414-hydroxyprolineBy similarity
Modified residuei1467 – 146714-hydroxyprolineBy similarity
Modified residuei1470 – 147014-hydroxyprolineBy similarity
Modified residuei1601 – 16011SulfotyrosineSequence Analysis
Modified residuei1604 – 16041SulfotyrosineSequence Analysis

Post-translational modificationi

Hydroxylation on proline residues within the sequence motif, GXPG, is most likely to be 4-hydroxy as this fits the requirement for 4-hydroxylation in vertebrates.By similarity
Sulfated on 40% of tyrosines.By similarity

Keywords - PTMi

Hydroxylation, Sulfation

Proteomic databases

MaxQBiO88207.
PaxDbiO88207.
PRIDEiO88207.

PTM databases

PhosphoSiteiO88207.

Expressioni

Tissue specificityi

Expressed in limbs, vertebrae, heart, brain, liver, intestine, tongue, tail, skin, calvaria, lung and kidney of E18 embryos.1 Publication

Developmental stagei

Detected at E11, E12, E14, E16 and E18.1 Publication

Gene expression databases

BgeeiO88207.
CleanExiMM_COL5A1.
ExpressionAtlasiO88207. baseline and differential.
GenevestigatoriO88207.

Interactioni

Subunit structurei

Trimers of two alpha 1(V) and one alpha 2(V) chains in most tissues and trimers of one alpha 1(V), one alpha 2(V), and one alpha 3(V) chains in placenta. Interacts with CSPG4 (By similarity).By similarity

Protein-protein interaction databases

BioGridi198821. 5 interactions.
IntActiO88207. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliO88207.
SMRiO88207. Positions 63-208, 1628-1837.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini72 – 244173Laminin G-likeAdd
BLAST
Domaini1609 – 1837229Fibrillar collagen NC1PROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni231 – 443213Nonhelical regionBy similarityAdd
BLAST
Regioni444 – 558115Interrupted collagenous regionBy similarityAdd
BLAST
Regioni559 – 15701012Triple-helical regionBy similarityAdd
BLAST
Regioni1571 – 160535Nonhelical regionBy similarityAdd
BLAST

Sequence similaritiesi

Belongs to the fibrillar collagen family.PROSITE-ProRule annotation
Contains 1 fibrillar collagen NC1 domain.PROSITE-ProRule annotation
Contains 1 laminin G-like domain.Curated

Keywords - Domaini

Collagen, Repeat, Signal

Phylogenomic databases

eggNOGiNOG12793.
GeneTreeiENSGT00770000120467.
HOGENOMiHOG000085654.
HOVERGENiHBG004933.
InParanoidiO88207.
KOiK06236.
OMAiPIGVVQM.
OrthoDBiEOG7XPZ4W.
PhylomeDBiO88207.
TreeFamiTF323987.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR008160. Collagen.
IPR013320. ConA-like_dom.
IPR000885. Fib_collagen_C.
IPR001791. Laminin_G.
[Graphical view]
PfamiPF01410. COLFI. 1 hit.
PF01391. Collagen. 6 hits.
PF02210. Laminin_G_2. 1 hit.
[Graphical view]
ProDomiPD002078. Fib_collagen_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00038. COLFI. 1 hit.
SM00282. LamG. 1 hit.
SM00210. TSPN. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
PROSITEiPS51461. NC1_FIB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O88207-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDVHTRWKAA RPGALLLSSP LLLFLLLLWA PPSSRAAQPA DLLEMLDFHN
60 70 80 90 100
LPSGVTKTTG FCATRRSSSE PDVAYRVSKD AQLSMPTKQL YPESGFPEDF
110 120 130 140 150
SILTTVKAKK GSQAFLVSIY NEQGIQQLGL ELGRSPVFLY EDHTGKPGPE
160 170 180 190 200
EYPLFPGINL SDGKWHRIAL SVYKKNVTLI LDCKKKITKF LSRSDHPIID
210 220 230 240 250
TNGIVMFGSR ILDDEIFEGD IQQLLFVSDN RAAYDYCEHY SPDCDTAVPD
260 270 280 290 300
TPQSQDPNPD EYYPEGEGET YYYEYPYYED PEDPGKEPAP TQKPVEAARE
310 320 330 340 350
TTEVPEEQTQ PLPEAPTVPE TSDTADKEDS LGIGDYDYVP PDDYYTPPPY
360 370 380 390 400
EDFGYGEGVE NPDQPTNPDS GAEVPTSTTV TSNTSNPAPG EGKDDLGGEF
410 420 430 440 450
TEETIKNLEE NYYDPYFDPD SDSSVSPSEI GPGMPANQDT IFEGIGGPRG
460 470 480 490 500
EKGQKGEPAI IEPGMLIEGP PGPEGPAGLP GPPGTTGPTG QMGDPGERGP
510 520 530 540 550
PGRPGLPGAD GLPGPPGTML MLPFRFGGGG DAGSKGPMVS AQESQAQAIL
560 570 580 590 600
QQARLALRGP AGPMGLTGRP GPMGPPGSGG LKGEPGDMGP QGPRGVQGPP
610 620 630 640 650
GPTGKPGRRG RAGSDGARGM PGQTGPKGDR GFDGLAGLPG EKGHRGDPGP
660 670 680 690 700
SGPPGIPGDD GERGDDGEVG PRGLPGEPGP RGLLGPKGPP GPPGPPGVTG
710 720 730 740 750
MDGQPGPKGN VGPQGEPGPP GQQGNPGAQG LPGPQGAIGP PGEKGPLGKP
760 770 780 790 800
GLPGMPGADG PPGHPGKEGP PGEKGGQGPP GPQGPIGYPG PRGVKGADGI
810 820 830 840 850
RGLKGTKGEK GEDGFPGFKG DMGIKGDRGE IGPPGPRGED GPEGPKGRGG
860 870 880 890 900
PNGDPGPLGP TGEKGKLGVP GLPGYPGRQG PKGSIGFPGF PGANGEKGGR
910 920 930 940 950
GTPGKPGPRG QRGPTGPRGE RGPRGITGKP GPKGNSGGDG PAGPPGERGP
960 970 980 990 1000
NGPQGPTGFP GPKGPPGPPG KDGLPGHPGQ RGETGFQGKT GPPGPPGVVG
1010 1020 1030 1040 1050
PQGPTGETGP MGERGHPGPP GPPGEQGLPG AAGKEGTKGD PGPAGLPGKD
1060 1070 1080 1090 1100
GPPGLRGFPG DRGLPGPVGA LGLKGSEGPP GPPGPAGSPG ERGPAGAAGP
1110 1120 1130 1140 1150
IGIPGRPGPQ GPPGPAGEKG LPGEKGPQGP AGRDGLQGPV GLPGPAGPVG
1160 1170 1180 1190 1200
PPGEDGDKGE IGEPGQKGSK GDKGEQGPPG PTGPQGPIGQ PGPSGADGEP
1210 1220 1230 1240 1250
GPRGQQGLFG QKGDEGSRGF PGPPGPVGLQ GLPGPPGEKG ETGDVGQMGP
1260 1270 1280 1290 1300
PGPPGPRGPS GAPGADGPQG PPGGIGNPGA VGEKGEPGEA GDPGLPGEGG
1310 1320 1330 1340 1350
PLGPKGERGE KGEAGPSGAA GPPGPKGPPG DDGPKGSPGP VGFPGDPGPP
1360 1370 1380 1390 1400
GEPGPAGQDG PPGDKGDDGE PGQTGSPGPT GEPGPSGPPG KRGPPGPAGP
1410 1420 1430 1440 1450
EGRQGEKGAK GEAGLEGPPG KTGPIGPQGA PGKPGPDGLR GIPGPVGEQG
1460 1470 1480 1490 1500
LPGSPGPDGP PGPMGPPGLP GLKGDSGPKG EKGHPGLIGL IGPPGEQGEK
1510 1520 1530 1540 1550
GDRGLPGPQG SSGPKGDQGI TGPSGPLGPP GPPGLPGPPG PKGAKGSSGP
1560 1570 1580 1590 1600
TGPKGEAGHP GLPGPPGPPG EVIQPLPIQA SRTRRNIDAS QLLDDGAGES
1610 1620 1630 1640 1650
YVDYADGMEE IFGSLNSLKL EIEQMKRPLG TQQNPARTCK DLQLCHPDFP
1660 1670 1680 1690 1700
DGEYWVDPNQ GCSRDSFKVY CNFTAGGSTC VFPDKKSEGA RITSWPKENP
1710 1720 1730 1740 1750
GSWFSEFKRG KLLSYVDAEG NPVGVVQMTF LRLLSASAHQ NVTYNCYQSV
1760 1770 1780 1790 1800
AWQDAATGSY DKAIRFLGSN DEEMSYDNNP YIRALVDGCA TKKGYQKTVL
1810 1820 1830
EIDTPKVEQV PIVDIMFNDF GEASQKFGFE VGPACFLG
Length:1,838
Mass (Da):183,677
Last modified:February 6, 2007 - v2
Checksum:iD20F4E5198A09ECF
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti1097 – 10971A → S in BAA28786. (PubMed:9582436)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB009993 mRNA. Translation: BAA28786.1.
AL731778, AL732513 Genomic DNA. Translation: CAM46247.1.
AB098608 Genomic DNA. Translation: BAD26732.1.
AK148055 mRNA. Translation: BAE28315.1.
CCDSiCCDS15831.1.
RefSeqiNP_056549.2. NM_015734.2.
UniGeneiMm.7281.

Genome annotation databases

EnsembliENSMUST00000028280; ENSMUSP00000028280; ENSMUSG00000026837.
GeneIDi12831.
KEGGimmu:12831.
UCSCiuc008ixt.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB009993 mRNA. Translation: BAA28786.1 .
AL731778 , AL732513 Genomic DNA. Translation: CAM46247.1 .
AB098608 Genomic DNA. Translation: BAD26732.1 .
AK148055 mRNA. Translation: BAE28315.1 .
CCDSi CCDS15831.1.
RefSeqi NP_056549.2. NM_015734.2.
UniGenei Mm.7281.

3D structure databases

ProteinModelPortali O88207.
SMRi O88207. Positions 63-208, 1628-1837.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 198821. 5 interactions.
IntActi O88207. 1 interaction.

PTM databases

PhosphoSitei O88207.

Proteomic databases

MaxQBi O88207.
PaxDbi O88207.
PRIDEi O88207.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000028280 ; ENSMUSP00000028280 ; ENSMUSG00000026837 .
GeneIDi 12831.
KEGGi mmu:12831.
UCSCi uc008ixt.2. mouse.

Organism-specific databases

CTDi 1289.
MGIi MGI:88457. Col5a1.

Phylogenomic databases

eggNOGi NOG12793.
GeneTreei ENSGT00770000120467.
HOGENOMi HOG000085654.
HOVERGENi HBG004933.
InParanoidi O88207.
KOi K06236.
OMAi PIGVVQM.
OrthoDBi EOG7XPZ4W.
PhylomeDBi O88207.
TreeFami TF323987.

Enzyme and pathway databases

Reactomei REACT_196606. ECM proteoglycans.
REACT_196607. Non-integrin membrane-ECM interactions.
REACT_196644. Syndecan interactions.
REACT_198984. Collagen biosynthesis and modifying enzymes.
REACT_199046. Assembly of collagen fibrils and other multimeric structures.
REACT_199055. Collagen degradation.
REACT_206066. Extracellular matrix organization.
REACT_216309. Integrin cell surface interactions.
REACT_236183. NCAM1 interactions.
REACT_263353. Signaling by PDGF.

Miscellaneous databases

ChiTaRSi Col5a1. mouse.
NextBioi 282334.
PROi O88207.
SOURCEi Search...

Gene expression databases

Bgeei O88207.
CleanExi MM_COL5A1.
ExpressionAtlasi O88207. baseline and differential.
Genevestigatori O88207.

Family and domain databases

Gene3Di 2.60.120.200. 1 hit.
InterProi IPR008160. Collagen.
IPR013320. ConA-like_dom.
IPR000885. Fib_collagen_C.
IPR001791. Laminin_G.
[Graphical view ]
Pfami PF01410. COLFI. 1 hit.
PF01391. Collagen. 6 hits.
PF02210. Laminin_G_2. 1 hit.
[Graphical view ]
ProDomi PD002078. Fib_collagen_C. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SMARTi SM00038. COLFI. 1 hit.
SM00282. LamG. 1 hit.
SM00210. TSPN. 1 hit.
[Graphical view ]
SUPFAMi SSF49899. SSF49899. 1 hit.
PROSITEi PS51461. NC1_FIB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "cDNA sequence and expression of the mouse alpha1(V) collagen gene."
    Wu Y.L., Sumiyoshi H., Khaleduzzaman M., Ninomiya Y., Yoshioka H.
    Biochim. Biophys. Acta 1397:275-284(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    Tissue: Embryo.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.
  3. "Identification of a functional CBF-binding CCAAT-like motif in the core promoter of the mouse pro-alpha1(V) collagen gene (Col5a1)."
    Sakata-Takatani K., Matsuo N., Sumiyoshi H., Tsuda T., Yoshioka H.
    Matrix Biol. 23:87-99(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-30, FUNCTION.
  4. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1156-1838.
    Strain: C57BL/6J.

Entry informationi

Entry nameiCO5A1_MOUSE
AccessioniPrimary (citable) accession number: O88207
Secondary accession number(s): A3KGE3, Q3UG94, Q6F6B0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: February 6, 2007
Last modified: November 26, 2014
This is version 118 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3