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Protein
Submitted name:

LysR-type transcriptional regulator

Gene

stgR

Organism
Streptomyces anulatus (Streptomyces chrysomallus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LysR-type transcriptional regulatorImported
Submitted name:
StgR proteinImported
Gene namesi
Name:stgRImported
OrganismiStreptomyces anulatus (Streptomyces chrysomallus)Imported
Taxonomic identifieri1892 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliO88132.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 60HTH lysR-type DNA-bindingInterPro annotationAdd BLAST58

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88132-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLDLALVRS FAITAEELHF RRAAERLFIT QQGLSQRIRR LELLLGVSLF
60 70 80 90 100
VRGNRSVALT EEGQRFLAPA RRVMEAADAA VQAVQPRERR PLRVDVVDGR
110 120 130 140 150
LAPLQLVRKL LEEDPELPLN LSMRQSLAAA LPALARDEID TAFGRVHDVQ
160 170 180 190 200
GWSAEFSHRL VRLEPLRALV PRTHPLAGRD EVRIDELRSC AIWQPRNGVP
210 220 230 240 250
SEWEHYVGRL ADSFGLSLAF SGAALSDEHF LEHLWSHGEM ACLAGADVSY
260 270 280 290 300
AFSPDIRSIP LVDPTPVYPW SMVWRRQAGH PLVDRLVGLA KRSAGDWLTH
310 320
VPGEIWLPAP DRALLRGAGV DVDAVRG
Length:327
Mass (Da):36,509
Last modified:November 1, 1998 - v1
Checksum:i99172FA4D3238C92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ005198 Genomic DNA. Translation: CAA06437.1.
AJ006517 Genomic DNA. Translation: CAA07077.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ005198 Genomic DNA. Translation: CAA06437.1.
AJ006517 Genomic DNA. Translation: CAA07077.1.

3D structure databases

ProteinModelPortaliO88132.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO88132_STRAQ
AccessioniPrimary (citable) accession number: O88132
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.